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Development in main June 24 #200

Merged
merged 463 commits into from
Jun 4, 2024
Merged

Development in main June 24 #200

merged 463 commits into from
Jun 4, 2024

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julesghub
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lmoresi and others added 30 commits June 4, 2023 22:20
File to place functions that may be useful. First function is to gather data on the root proc which could also be broadcast to all processors.
…s method for ipython help so that we can ask about solvers before using them.
…g. These are in place now and I am going back to try to get the tests and notebooks working again.
Add a action to build and push a docker to dockerhub
invalid tag name fix
Setting docker build on VEP branch only
Add a action to build and push a docker to dockerhub: `julesg/underworld3:VEP-preliminary-implementation`
.
Fix cython version to <3.0
1. Added a pytest with a pic sensitive stokes solve.
2. Merged in non-breaking changes from the Mask2Matrix branch. Still
mask variables are NOT a matrix as discussed.
Re-write estimate_dt to remove divide by 0 error
Re-write estimate_dt to remove divide by 0 error
lmoresi and others added 21 commits April 4, 2024 21:10
issue #179

Co-authored-by: Juan Carlos Graciosa <juan.graciosa@monash.edu>
* Fixes for swarm substepping

* Checking

* Monitor 1

* breaking in numpy - check that instead

* typo

* Odd

* interaction between swarm.access and swarm.dm.getLocalSize()

* IndexError also possible ...

* typo - fix
…h probably broke all the NS and AD benchmarks. Suggest we add a test for this based on the 1D adv-diffusion solver example which finally picked up the problem.
…ted (they are currently not imported at all).
changed jupyter_backend to trame
All conditions are now turned into a list before conversion.
Modifying test to test the conversion code.
conda recipe updates
Updating the interpolation routines.

These c functions are direct copies of the petsc routines
DMInterpolation_SetUp and DMInterpolation_Evaluate, only
with owning_cell information provided and used. Until petsc can
optionally use 'owning_cells' we will have to manually update the c code
like this commit.
* importing underworld3.mpi earlier on to avoid circular imports

* Only get the communicator via underworld3.mpi.comm
fix pyvista issue in binder, check whether it is running in binder or not
@julesghub julesghub changed the title Development Development in main June 24 Jun 4, 2024
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Capturing main changes.

@julesghub julesghub closed this Jun 4, 2024
@julesghub julesghub reopened this Jun 4, 2024
@julesghub julesghub marked this pull request as ready for review June 4, 2024 04:53
@julesghub julesghub requested a review from lmoresi June 4, 2024 04:53
@julesghub
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Please squash a merge @lmoresi.

This is a to put dev onto main.
I'll do another PR to put uw_constants onto dev after you ok this.

@julesghub julesghub merged commit 9053df4 into main Jun 4, 2024
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6 participants