Adding nutrients components #14 #43
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| name: Advanced tests | |
| on: | |
| pull_request: | |
| types: [ready_for_review, opened] | |
| branches: [main] | |
| jobs: | |
| run-advanced-tests: | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| python-version: ["3.8", "3.9", "3.10", "3.11"] | |
| fail-fast: false | |
| runs-on: ${{ matrix.os }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| # check out PR HEAD commit | |
| - name: check out PR HEAD commit | |
| uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ github.event.pull_request.head.sha }} | |
| # set up a conda environment | |
| - name: set up miniconda environment | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: testing-env | |
| python-version: ${{ matrix.python-version }} | |
| auto-update-conda: true | |
| mamba-version: "*" | |
| miniconda-version: "latest" | |
| channels: conda-forge | |
| channel-priority: true | |
| # install dependencies on conda environment | |
| - name: install package dependencies | |
| run: | | |
| mamba install udunits2=2.2.25 | |
| mamba install --file=requirements.txt | |
| mamba install --file=requirements-tests.txt | |
| # build dummy components required for tests | |
| - name: make gfortran available (macos only) | |
| if: matrix.os == 'macos-latest' | |
| run: | | |
| sudo ln -s /usr/local/bin/gfortran-10 /usr/local/bin/gfortran | |
| sudo mkdir /usr/local/gfortran | |
| sudo ln -s /usr/local/Cellar/gcc@10/*/lib/gcc/10 /usr/local/gfortran/lib | |
| - name: build dummy C and Fortran components | |
| run: | | |
| (cd ./tests/tests/components && make) | |
| # install latest cf-python package | |
| - name: install package | |
| run: | | |
| pip install https://github.com/NCAS-CMS/cf-python/archive/main.zip | |
| # install package | |
| - name: install package | |
| run: | | |
| pip install -e . | |
| # run tests | |
| - name: run advanced tests 1 (SameTimeSameSpace) | |
| run: | | |
| (cd ./tests && python run_stss_tests.py) | |
| # run tests | |
| - name: run advanced tests 2 (SameTimeDiffSpace) | |
| run: | | |
| (cd ./tests && python run_stds_tests.py) | |
| # run tests | |
| - name: run advanced tests 3 (DiffTimeSameSpace) | |
| run: | | |
| (cd ./tests && python run_dtss_tests.py) | |
| # run tests | |
| - name: run advanced tests 4 (DiffTimeDiffSpace) | |
| run: | | |
| (cd ./tests && python run_dtds_tests.py) |