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Merge pull request #125 from mthang/filsender_update
fix xml, add macros.xml and README
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# AARNet FileSender | ||
ENA-upload-cli wrapper | ||
====================== | ||
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This is a wrapper for AARNet's FileSender, using the FileSender CLI tool. | ||
Galaxy wrapper of the AARNET | ||
`filesender <https://support.aarnet.edu.au/hc/en-us/articles/230067927-Send-files-with-FileSender>`__. | ||
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Setting up credentials on Galaxy | ||
-------------------------------- | ||
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The admin can enable users to set their own credentials | ||
for this tool. To enable it, make sure the file | ||
``config/user_preferences_extra_conf.yml`` has the following section: | ||
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.. code-block:: yaml | ||
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aarnet_filesender_account: | ||
description: AARNet FileSender Account Info | ||
inputs: | ||
- name: username | ||
label: AARNet FileSender Username | ||
type: text | ||
required: False | ||
- name: apikey | ||
label: AARNet FileSender API Key | ||
type: password | ||
required: False |
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Uploading: Xnatutils on data 2424: log 100% | ||
Xnatutils on data 2424: log complete | ||
Upload Complete |
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Core genes (99% <= strains <= 100%) 251 | ||
Soft core genes (95% <= strains < 99%) 0 | ||
Shell genes (15% <= strains < 95%) 0 | ||
Cloud genes (0% <= strains < 15%) 0 | ||
Total genes (0% <= strains <= 100%) 251 |