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asaim.yaml.lock
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asaim.yaml.lock
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install_repository_dependencies: true
install_resolver_dependencies: true
install_tool_dependencies: false
tools:
- name: suite_ebi_tools
owner: iuc
revisions:
- 9de1dc59ff70
tool_panel_section_label: Get Data
- name: suite_enasearch
owner: iuc
revisions:
- 3aa846f62284
tool_panel_section_label: Get Data
- name: suite_ncbi_entrez
owner: iuc
revisions:
- 3c74f6208bc5
tool_panel_section_label: Get Data
- name: sra_tools
owner: iuc
revisions:
- b723c120161a
tool_panel_section_label: Get Data
- name: fastqc
owner: devteam
revisions:
- 3a458e268066
- 3fdc1a74d866
- 9337dd1fbc66
- 484e86282f4b
- 28d39af2dd06
- e28c965eeed4
- 0b201de108b9
- d2cf2c0c8a11
tool_panel_section_label: Quality Control
- name: prinseq
owner: iuc
revisions:
- 6b865dde1baa
tool_panel_section_label: Quality Control
- name: trim_galore
owner: bgruening
revisions:
- 1bf4789584dc
- 11962ce40855
- f1e71aeaa923
- eb546ac2aab2
- 2c1f0fe810f7
- 949f01671246
- 8352713cf939
tool_panel_section_label: Quality Control
- name: trimmomatic
owner: pjbriggs
revisions:
- 2bd7cdbb6228
- 415a165d92bb
- a60283899c6d
- 14d05f2d511d
- f8a9a5eaca8a
tool_panel_section_label: Quality Control
- name: multiqc
owner: iuc
revisions:
- e4574a4d09d8
tool_panel_section_label: Quality Control
- name: cdhit
owner: bebatut
revisions:
- 54d811ad2b52
tool_panel_section_label: Multiple Alignments
- name: format_cd_hit_output
owner: bebatut
revisions:
- 4015e9d6d277
tool_panel_section_label: Multiple Alignments
- name: sortmerna
owner: rnateam
revisions:
- 65c38d020fea
- 59252ca85c74
- 185effcdfb68
- b482293b2987
tool_panel_section_label: Annotation
- name: data_manager_sortmerna_database_downloader
owner: rnateam
revisions:
- 30bb49887172
tool_panel_section_label: Data Managers
- name: ncbi_blast_plus
owner: devteam
revisions:
- 2fe07f50a41e
- 3034ce97dd33
- 6f386c5dc4fb
- 7538e2bfcd41
- 6560192c5098
- 623f727cdff1
- 577d9c12411a
- 7f3c448e119b
- 393a7a35383c
- 70e7dcbf6573
- 9dabbfd73c8a
- b5f1f599d1fb
tool_panel_section_label: NCBI Blast
- name: diamond
owner: bgruening
revisions:
- 98037ef3d2a9
- 3c6b132b154a
tool_panel_section_label: NCBI Blast
- name: bwa
owner: devteam
revisions:
- 48f306c57611
tool_panel_section_label: Mapping
- name: bowtie2
owner: devteam
revisions:
- a9d4f71dbfb0
- 96d2e31a3938
- 019c2a81547a
- ceb6467e276c
- 8ccbdbe9a695
- c1ec08cb34f9
- 42bb952b4e3c
tool_panel_section_label: Mapping
- name: hmmer3
owner: iuc
revisions:
- b5066aa77fea
tool_panel_section_label: Annotation
- name: vsearch
owner: iuc
revisions:
- fae6527990af
tool_panel_section_label: Metagenomic analyses
- name: nonpareil
owner: iuc
revisions:
- 280386b252a5
tool_panel_section_label: Metagenomic analyses
- name: megahit
owner: iuc
revisions:
- 02a822e32de7
tool_panel_section_label: Assembly
- name: metaspades
owner: nml
revisions:
- 01a241476407
tool_panel_section_label: Assembly
- name: quast
owner: iuc
revisions:
- 736d51130b41
tool_panel_section_label: Assembly
- name: valet
owner: iuc
revisions:
- 56236acaad45
tool_panel_section_label: Metagenomic analyses
- name: suite_mothur
owner: iuc
revisions:
- 768c2e48b706
tool_panel_section_label: mothur
- name: suite_qiime
owner: iuc
revisions:
- b2e54849fd5c
tool_panel_section_label: Qiime
- name: data_manager_qiime_database_downloader
owner: iuc
revisions:
- cbe065fbd038
tool_panel_section_label: Data Managers
- name: suite_metaphlan2
owner: iuc
revisions:
- ae46e4116c61
tool_panel_section_label: Metagenomic analyses
- name: format_metaphlan2_output
owner: bebatut
revisions:
- 2bfa9b200600
tool_panel_section_label: Metagenomic analyses
- name: suite_kraken_0_10_5
owner: devteam
revisions:
- 1bcf0e168661
tool_panel_section_label: Metagenomic analyses
- name: suite_humann2
owner: iuc
revisions:
- b6817cd584e1
tool_panel_section_label: Metagenomic analyses
- name: group_humann2_uniref_abundances_to_go
owner: bebatut
revisions:
- cad28d7b49d2
tool_panel_section_label: Metagenomic analyses
- name: compare_humann2_output
owner: bebatut
revisions:
- c1aca37cb1fc
tool_panel_section_label: Metagenomic analyses
- name: interproscan5
owner: bgruening
revisions:
- 82547f0d3a29
tool_panel_section_label: Metagenomic analyses
- name: suite_picrust
owner: iuc
revisions:
- 9a3fe0bd7481
- c48e45864e0c
tool_panel_section_label: Annotation
- name: combine_metaphlan2_humann2
owner: bebatut
revisions:
- 31394a0c0242
tool_panel_section_label: Metagenomic analyses
- name: export2graphlan
owner: iuc
revisions:
- ed1becc01910
tool_panel_section_label: Graph/Display Data
- name: suite_graphlan
owner: iuc
revisions:
- 0e3b8782641c
tool_panel_section_label: Graph/Display Data
- name: taxonomy_krona_chart
owner: crs4
revisions:
- 020b3087d0b7
- f11a04ed443b
- 09552faff9c0
tool_panel_section_label: Graph/Display Data