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fix: another issue in enum protobuf conversion (with regions) #335

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merged 1 commit into from
Nov 24, 2023
Merged

fix: another issue in enum protobuf conversion (with regions) #335

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6 changes: 3 additions & 3 deletions src/genes/cli/data.rs
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Original file line number Diff line number Diff line change
Expand Up @@ -1363,9 +1363,9 @@ pub mod hgnc {
Withdrawn,
}

impl Into<pbs::genes::base::HgncStatus> for Status {
fn into(self) -> pbs::genes::base::HgncStatus {
match self {
impl From<Status> for pbs::genes::base::HgncStatus {
fn from(val: Status) -> Self {
match val {
Status::Approve => pbs::genes::base::HgncStatus::Approved,
Status::Withdrawn => pbs::genes::base::HgncStatus::Withdrawn,
}
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10 changes: 7 additions & 3 deletions src/regions/cli/import.rs
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Expand Up @@ -5,7 +5,7 @@ use std::sync::Arc;
use clap::Parser;
use prost::Message;

use crate::{common, genes::cli::data::clingen_gene};
use crate::{common, genes::cli::data::clingen_gene, pbs};

/// Helper data structures for reading CSV files.
pub mod clingen {
Expand Down Expand Up @@ -178,8 +178,12 @@ fn tsv_import(
isca_id,
isca_region_name,
genomic_location,
haploinsufficiency_score: haploinsufficiency_score as i32,
triplosensitivity_score: triplosensitivity_score as i32,
haploinsufficiency_score: Into::<pbs::genes::base::ClingenDosageScore>::into(
haploinsufficiency_score,
) as i32,
triplosensitivity_score: Into::<pbs::genes::base::ClingenDosageScore>::into(
triplosensitivity_score,
) as i32,
haploinsufficiency_disease_id,
triplosensitivity_disease_id,
};
Expand Down
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