sagemathgh-37938: Updates to linbox-1.7.0, givaro-4.2.0, fflas-ffpack…

…-2.5.0

### 📚 Description

Draft PR taken from sagemath#35148. I rebased on top of 10.4 and added two more
patches taken from upstream

@ClementPernet

closes sagemath#32959
closes sagemath#35148

URL: sagemath#37938
Reported by: Volker Braun
Reviewer(s):

build/pkgs/configure/checksums.ini

@@ -1,4 +1,4 @@
 tarball=configure-VERSION.tar.gz
-sha1=599182ff950764df31446f7bf8350499717dc76e
-md5=06e0643f4948ad4b4c87d2530d026a1f
-cksum=4286155814
+sha1=fcc7a915c6597a65a80354a05d08dde1cd1f2219
+md5=4bfa7e14f9ff7fd4f9c1d20ed4510952
+cksum=1641534268

build/pkgs/configure/package-version.txt

@@ -1 +1 @@
-e77b3df44ade2f51f750de90ad255f772a933776
+58ee28135bd13dec49617367915262e94945ab91

build/pkgs/fflas_ffpack/checksums.ini

@@ -1,4 +1,5 @@
 tarball=fflas_ffpack-VERSION.tar.bz2
-sha1=c221513710b98e0e62153f424a9725c5be2ff62a
-md5=05c77ea30394cacd53b7aed6ffba1e7b
-cksum=3775757878
+sha1=7c5faa81abc2b88ec24cec373b5e44cbaa7844dd
+md5=d8b7c113951a2a3f498a3aaadbe5620f
+cksum=3321469120
+upstream_url=https://github.com/linbox-team/fflas-ffpack/releases/download/vVERSION/fflas_ffpack-VERSION.tar.bz2

build/pkgs/fflas_ffpack/package-version.txt

@@ -1 +1 @@
-2.4.3.p0
+2.5.0

build/pkgs/fflas_ffpack/patches/357.patch

@@ -0,0 +1,35 @@
+From 9b6083c663096e9ca85775b79f1f27c848dbeb98 Mon Sep 17 00:00:00 2001
+From: Cyril Bouvier <cyril.bouvier@lirmm.fr>
+Date: Fri, 17 Dec 2021 10:27:02 +0100
+Subject: [PATCH] Fix SimdChooser: on not x86_64 machines its value could be an
+ nonexistant struct
+
+---
+ fflas-ffpack/fflas/fflas_simd.h | 14 ++++++++++++++
+ 1 file changed, 14 insertions(+)
+
+diff --git a/fflas-ffpack/fflas/fflas_simd.h b/fflas-ffpack/fflas/fflas_simd.h
+index bf5d30211..84ced0fd8 100644
+--- a/fflas-ffpack/fflas/fflas_simd.h
++++ b/fflas-ffpack/fflas/fflas_simd.h
+@@ -384,6 +384,20 @@ struct SimdChooser<T, true, true> // integral number
+ #endif
+ };
+
++#ifndef __x86_64__
++template <>
++struct SimdChooser<uint64_t, true, true>
++{
++    using value = NoSimd<uint64_t>;
++};
++
++template <>
++struct SimdChooser<int64_t, true, true>
++{
++    using value = NoSimd<int64_t>;
++};
++#endif
++
+ template <class T> using Simd = typename SimdChooser<T>::value;
+
+ // template <class T> struct SimdChooser<T, true> {

build/pkgs/fflas_ffpack/spkg-configure.m4

@@ -4,7 +4,7 @@ SAGE_SPKG_CONFIGURE([fflas_ffpack], [
     # the system fflas-ffpack, too. Use pkg-config to find a
     # recentish version, if there is one.
     PKG_CHECK_MODULES([FFLAS_FFPACK],
-                      [fflas-ffpack >= 2.4.0],dnl The version test is refined in linbox/spkg-configure.m4
+                      [fflas-ffpack >= 2.5.0],dnl The version test is refined in linbox/spkg-configure.m4
                       [sage_spkg_install_fflas_ffpack=no],
                       [sage_spkg_install_fflas_ffpack=yes])
   ])

build/pkgs/givaro/checksums.ini

@@ -1,4 +1,5 @@
 tarball=givaro-VERSION.tar.gz
-sha1=2e7af1537d6f8325578a54d5b8092c990028863d
-md5=b27c7713fcdced257df5f17b7bec8fd5
-cksum=731010730
+sha1=73ef15ca34c6f1c9f61013d2bd7d4d547e3ace14
+md5=d03ca4ba1e4a44c20935cf2adfcb520b
+cksum=3088182773
+upstream_url=https://github.com/linbox-team/givaro/releases/download/vVERSION/givaro-VERSION.tar.gz

build/pkgs/givaro/package-version.txt

@@ -1 +1 @@
-4.1.1
+4.2.0

build/pkgs/givaro/patches/197.patch

@@ -0,0 +1,28 @@
+From ab3d332508c21daff41fb64a8658cdc7cc74fc47 Mon Sep 17 00:00:00 2001
+From: Cyril Bouvier <cyril.bouvier@lirmm.fr>
+Date: Thu, 16 Dec 2021 17:12:25 +0100
+Subject: [PATCH] dom_power argument is now an uint64_t to avoid problem with
+ 32bit machine
+
+---
+ src/kernel/system/givpower.h | 4 ++--
+ 1 file changed, 2 insertions(+), 2 deletions(-)
+
+diff --git a/src/kernel/system/givpower.h b/src/kernel/system/givpower.h
+index eb784872..5644264d 100644
+--- a/src/kernel/system/givpower.h
++++ b/src/kernel/system/givpower.h
+@@ -71,11 +71,11 @@ namespace Givaro {
+
+     //! dom_power
+     template<class D, class TT>
+-    TT& dom_power(TT& res, const TT& n, long l, const D& F)
++    TT& dom_power(TT& res, const TT& n, uint64_t l, const D& F)
+     {
+         if (l == 0) return F.assign(res,F.one) ;
+
+-        unsigned long p = (unsigned long) l ;
++        uint64_t p = l;
+         bool is_assg = false ;
+
+         TT puiss; F.init(puiss); F.assign(puiss,n) ;

build/pkgs/givaro/patches/226.patch

@@ -0,0 +1,30 @@
+From 20caba1b549fe46b483f120f8eec6ec4e9f4572d Mon Sep 17 00:00:00 2001
+From: "Benjamin A. Beasley" <code@musicinmybrain.net>
+Date: Thu, 25 Jan 2024 08:29:17 -0500
+Subject: [PATCH] Temporary GCC 14 workaround
+MIME-Version: 1.0
+Content-Type: text/plain; charset=UTF-8
+Content-Transfer-Encoding: 8bit
+
+Fixes https://github.com/linbox-team/givaro/issues/226 “GCC 14: No match
+for operator= for Givaro::ZRing<Givaro::Integer>”
+
+Recommended in
+https://github.com/linbox-team/givaro/issues/226#issuecomment-1908853755
+---
+ src/kernel/integer/random-integer.h | 1 -
+ 1 file changed, 1 deletion(-)
+
+diff --git a/src/kernel/integer/random-integer.h b/src/kernel/integer/random-integer.h
+index f9361d33..ea189a36 100644
+--- a/src/kernel/integer/random-integer.h
++++ b/src/kernel/integer/random-integer.h
+@@ -87,7 +87,6 @@ namespace Givaro
+             if (this != &R) {
+                 _bits = R._bits;
+                 _integer = R._integer;
+-                const_cast<Integer_Domain&>(_ring)=R._ring;
+             }
+             return *this;
+         }
+--