This repository holds visualizations written in React and D3 for JSON results generated by HyPhy. Reading raw numerical data can be tedious, and would oftentimes require a number of post-processing steps in your favorite scripting language to make sense of it. While you definitely can still do that, we provide custom, interactive, web-based visualizations to help facilitate making inferences about your results and less time data munging.
Visit the associated site for this page at here.
If you want to start exploring various ways of detecting selection on your sequence data now, please visit Datamonkey or Datamonkey Test with your multiple sequence alignment ready (in FASTA or NEXUS format). You can also run our methods locally by installing HyPhy.
Read our contributing guide to learn about our development process, how to propose bugfixes and improvements, and how to build and test your changes.
HyPhy Vision uses yarn for package management.
git clone https://github.com/veg/hyphy-vision
cd hyphy-vision
yarn
Start the development server:
yarn start
Deploy in a production environment:
webpack
supervisor server.js
Start the desktop application:
yarn run electron