mange dependencies of submodules

violethaze74-jazzededtech · Feb 5, 2021 · 07400eb · 07400eb
1 parent 6b87981
commit 07400eb
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Showing 12 changed files with 438 additions and 193 deletions.
diff --git a/core/pom.xml b/core/pom.xml
@@ -36,47 +36,38 @@
     <dependency>
       <groupId>org.owasp</groupId>
       <artifactId>antisamy</artifactId>
-      <version>1.4</version>
     </dependency>
 
     <!-- antlr -->
     <dependency>
       <groupId>org.antlr</groupId>
       <artifactId>antlr-runtime</artifactId>
-      <version>3.2</version>
     </dependency>
 
     <!-- apache commons -->
     <dependency>
       <groupId>commons-collections</groupId>
       <artifactId>commons-collections</artifactId>
-      <version>3.2.2</version>
     </dependency>
     <dependency>
       <groupId>org.apache.geronimo.bundles</groupId>
       <artifactId>commons-discovery</artifactId>
-      <version>0.4_1</version>
-      <scope>runtime</scope>
     </dependency>
     <dependency>
       <groupId>org.apache.commons</groupId>
       <artifactId>commons-dbcp2</artifactId>
-      <version>2.1.1</version>
     </dependency>
     <dependency>
       <groupId>commons-fileupload</groupId>
       <artifactId>commons-fileupload</artifactId>
-      <version>1.3.3</version>
     </dependency>
     <dependency>
       <groupId>commons-io</groupId>
       <artifactId>commons-io</artifactId>
-      <version>2.4</version>
     </dependency>
     <dependency>
       <groupId>commons-httpclient</groupId>
       <artifactId>commons-httpclient</artifactId>
-      <version>3.1</version>
     </dependency>
     <dependency>
       <groupId>org.apache.httpcomponents</groupId>
@@ -85,7 +76,6 @@
     <dependency>
       <groupId>commons-cli</groupId>
       <artifactId>commons-cli</artifactId>
-      <version>1.3</version>
     </dependency>
 
     <!-- jackson -->
@@ -106,48 +96,40 @@
     <dependency>
       <groupId>javax.servlet</groupId>
       <artifactId>javax.servlet-api</artifactId>
-      <version>3.0.1</version>
-      <scope>provided</scope>
     </dependency>
 
     <!-- jopt -->
     <dependency>
       <groupId>net.sf.jopt-simple</groupId>
       <artifactId>jopt-simple</artifactId>
-      <version>3.0-rc2</version>
     </dependency>
 
     <!-- json simple  -->
     <dependency>
       <groupId>com.googlecode.json-simple</groupId>
       <artifactId>json-simple</artifactId>
-      <version>1.1</version>
     </dependency>
 
     <!-- jung -->
     <dependency>
       <groupId>net.sf.jung</groupId>
       <artifactId>jung-api</artifactId>
-      <version>2.0.1</version>
     </dependency>
     <dependency>
       <groupId>net.sf.jung</groupId>
       <artifactId>jung-graph-impl</artifactId>
-      <version>2.0.1</version>
     </dependency>
 
     <!-- opencsv -->
     <dependency>
       <groupId>net.sf.opencsv</groupId>
       <artifactId>opencsv</artifactId>
-      <version>2.3</version>
     </dependency>
 
     <!-- BioJava 4.x -->
     <dependency>
       <groupId>org.biojava</groupId>
       <artifactId>biojava-core</artifactId>
-      <version>4.2.0</version>
       <exclusions>
         <exclusion>
           <groupId>org.apache.logging.log4j</groupId>
@@ -166,7 +148,6 @@
     <dependency>
       <groupId>org.biojava</groupId>
       <artifactId>biojava-structure</artifactId>
-      <version>4.2.0</version>
       <exclusions>
         <exclusion>
           <groupId>org.apache.logging.log4j</groupId>
@@ -187,40 +168,27 @@
     <dependency>
       <groupId>org.mockito</groupId>
       <artifactId>mockito-core</artifactId>
-      <version>${mockito.version}</version>
-      <scope>test</scope>
-      <exclusions>
-        <exclusion>
-          <artifactId>hamcrest-core</artifactId>
-          <groupId>org.hamcrest</groupId>
-        </exclusion>
-      </exclusions>
     </dependency>
     <dependency>
       <groupId>org.apache.commons</groupId>
       <artifactId>commons-io</artifactId>
-      <version>1.3.2</version>
     </dependency>
     <dependency>
       <groupId>commons-codec</groupId>
       <artifactId>commons-codec</artifactId>
-      <version>1.10</version>
     </dependency>
     <!--svg to PDF Converter-->
     <dependency>
       <groupId>batik</groupId>
       <artifactId>batik</artifactId>
-      <version>1.5</version>
     </dependency>
     <dependency>
       <groupId>batik</groupId>
       <artifactId>batik-rasterizer</artifactId>
-      <version>1.5</version>
     </dependency>
     <dependency>
       <groupId>org.apache.xmlgraphics</groupId>
       <artifactId>batik-codec</artifactId>
-      <version>1.7</version>
       <exclusions>
         <exclusion>
           <groupId>xalan</groupId>
@@ -231,23 +199,19 @@
     <dependency>
       <groupId>org.apache.xmlgraphics</groupId>
       <artifactId>fop</artifactId>
-      <version>1.0</version>
     </dependency>
     <dependency>
       <groupId>xerces</groupId>
       <artifactId>xercesImpl</artifactId>
-      <version>2.11.0</version>
     </dependency>
     <!--xml parser-->
     <dependency>
       <groupId>dom4j</groupId>
       <artifactId>dom4j</artifactId>
-      <version>1.6.1</version>
     </dependency>
     <dependency>
       <groupId>jaxen</groupId>
       <artifactId>jaxen</artifactId>
-      <version>1.1.6</version>
     </dependency>
     <dependency>
       <groupId>org.springframework</groupId>
@@ -260,14 +224,6 @@
     <dependency>
       <groupId>org.easymock</groupId>
       <artifactId>easymock</artifactId>
-      <version>3.2</version>
-      <scope>test</scope>
-      <exclusions>
-        <exclusion>
-          <groupId>cglib</groupId>
-          <artifactId>cglib-nodep</artifactId>
-        </exclusion>
-      </exclusions>
     </dependency>
     <dependency>
       <groupId>org.mskcc.cbio</groupId>

diff --git a/persistence/persistence-api/pom.xml b/persistence/persistence-api/pom.xml
@@ -19,12 +19,10 @@
     <dependency>
       <groupId>javax.cache</groupId>
       <artifactId>cache-api</artifactId>
-      <version>1.1.0</version>
     </dependency>
     <dependency>
       <groupId>org.ehcache</groupId>
       <artifactId>ehcache</artifactId>
-      <version>3.7.1</version>
     </dependency>
     <dependency>
       <groupId>org.redisson</groupId>

diff --git a/persistence/persistence-mybatis/pom.xml b/persistence/persistence-mybatis/pom.xml
@@ -33,14 +33,10 @@
         <dependency>
             <groupId>com.h2database</groupId>
             <artifactId>h2</artifactId>
-            <version>1.4.197</version>
-            <scope>test</scope>
         </dependency>
         <dependency>
             <groupId>org.apache.commons</groupId>
             <artifactId>commons-dbcp2</artifactId>
-            <version>2.1.1</version>
-            <scope>test</scope>
         </dependency>
     </dependencies>
 </project>
diff --git a/persistence/pom.xml b/persistence/pom.xml
@@ -13,8 +13,6 @@
         <dependency>
             <groupId>org.osgi</groupId>
             <artifactId>org.osgi.service.component.annotations</artifactId>
-            <version>1.4.0</version>
-            <scope>provided</scope>
         </dependency>
         <dependency>
             <groupId>javax.annotation</groupId>