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  1. chipulate chipulate Public

    A Python3 framework to simulate read counts in a ChIP-seq experiment.

    Jupyter Notebook 6 4

  2. cpi-em cpi-em Public

    ChIP-seq Peak Intensity - Expectation Maximization (CPI-EM) algorithm for detecting cooperatively bound transcription factor pairs

    Python 4

  3. infection-trees infection-trees Public

    Jupyter Notebook