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This addresses some of the easiest suggestions in #4990.
Because this config file is used by multiple versions of MySQL, not all changes are possible. After #4987 merges, the settings only required by MySQL 5.6 (such as sql_mode) can be moved to a separate file and further cleanup is possible.
I will add future improvements in followup PRs, after splitting config file per version.
Signed-off-by: Morgan Tocker tocker@gmail.com