fix bug in tests for makeSignatures related to homogenization of vari…

…able names
waldronlab · Jun 21, 2024 · aa4fd47 · aa4fd47
1 parent a511505
commit aa4fd47
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Showing 2 changed files with 4 additions and 4 deletions.
diff --git a/tests/testthat/test-makeSignatures-DataFrame.R b/tests/testthat/test-makeSignatures-DataFrame.R
@@ -1,9 +1,9 @@
 library(purrr)
 library(S4Vectors)
 bp <- map(importBugphyzz(), DataFrame)
-sigsNames <- map(bp, ~ makeSignatures(.x, tax_id_type = "Taxon_name")) |>
+sigsNames <- map(bp, ~ makeSignatures(.x, taxIdType = "Taxon_name")) |>
     list_flatten(name_spec = "{inner}")
-sigsIDs <- map(bp, ~ makeSignatures(.x, tax_id_type = "NCBI_ID")) |>
+sigsIDs <- map(bp, ~ makeSignatures(.x, taxIdType = "NCBI_ID")) |>
     list_flatten(name_spec = "{inner}")
 
 test_that("makeSignatures works with IDs", {

diff --git a/tests/testthat/test-makeSignatures.R b/tests/testthat/test-makeSignatures.R
@@ -1,8 +1,8 @@
 library(purrr)
 bp <- importBugphyzz()
-sigsNames <- map(bp, ~ makeSignatures(.x, tax_id_type = "Taxon_name")) |>
+sigsNames <- map(bp, ~ makeSignatures(.x, taxIdType = "Taxon_name")) |>
     list_flatten(name_spec = "{inner}")
-sigsIDs <- map(bp, ~ makeSignatures(.x, tax_id_type = "NCBI_ID")) |>
+sigsIDs <- map(bp, ~ makeSignatures(.x, taxIdType = "NCBI_ID")) |>
     list_flatten(name_spec = "{inner}")
 
 test_that("makeSignatures works with IDs", {