Misc. changes

wang-q · Dec 2, 2024 · b5d2619 · b5d2619
1 parent 5831407
commit b5d2619
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/src/cmd/contained.rs b/src/cmd/contained.rs
@@ -137,7 +137,7 @@ pub fn execute(args: &ArgMatches) -> anyhow::Result<()> {
     for (i, infile) in abs_infiles.iter().enumerate() {
         run_cmd!(
             hnsm filter -a ${min_len} ${infile} |
-                ${anchr} dazzname --no-replace -p ${prefix}_${i} stdin -o infile.${i}.fasta
+                ${anchr} dazzname --no-replace --prefix ${prefix}_${i} stdin -o infile.${i}.fasta
         )?;
         infiles.push(format!("infile.{}.fasta", i));
     }

diff --git a/templates/2_insert_size.tera.sh b/templates/2_insert_size.tera.sh
@@ -25,7 +25,7 @@ for PREFIX in R S T; do
         overwrite {% if opt.prefilter != "0" %}prefilter={{ opt.prefilter }}{% endif %}
 
     cat ${PREFIX}.tadpole.contig.fasta |
-        anchr dazzname --no-replace -p T stdin \
+        anchr dazzname --no-replace --prefix T stdin \
         > ${PREFIX}.tadpole.contig.fa
 
     bbmap.sh \