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Update unitigs.tera.sh
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wang-q committed Nov 30, 2024
1 parent ca68df0 commit d757158
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion templates/unitigs.tera.sh
Original file line number Diff line number Diff line change
Expand Up @@ -62,7 +62,7 @@ log_info Creating unitigs
{% elif opt.unitigger == "bifrost" -%}
Bifrost build --input-seq-file pe.cor.fa \
--kmer-length {{ kmer }} --clip-tips --del-isolated \
--threads {{ opt.parallel }} --fasta --output-file unitigs_K{{ kmer }}
--threads {{ opt.parallel }} --fasta --no-compress-out --output-file unitigs_K{{ kmer }}
{% else -%}
create_k_unitigs_large_k -c $(({{ kmer }}-1)) -t {{ opt.parallel }} \
-m {{ kmer }} -n $ESTIMATED_GENOME_SIZE -l {{ kmer }} -f 0.000001 \
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