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wang-q committed Jun 21, 2023
1 parent 2ede819 commit 465d834
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Showing 2 changed files with 2 additions and 2 deletions.
2 changes: 1 addition & 1 deletion templates/ass_collect.tera.sh
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ log_warn collect.sh

touch check.lst

echo -e "name\t{{ ass_columns | join(sep="\t") }}" \
echo -e "#name\t{{ ass_columns | join(sep="\t") }}" \
> collect.tsv

cat url.tsv |
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2 changes: 1 addition & 1 deletion templates/ass_finish.tera.sh
Original file line number Diff line number Diff line change
Expand Up @@ -42,7 +42,7 @@ cat "collect.pass.tsv" |
log_info "Representative or reference strains"
cat collect.pass.tsv |
tsv-filter -H --not-empty "RefSeq_category" |
tsv-select -H -f name |
tsv-select -f 1 |
sed '1d' \
> rep.lst

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