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Improve quantile_align_SNF and distortion_metric functions #1

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merged 1 commit into from
Jun 8, 2018

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Use irlba_prcomp to speed up distortion metric calculation.
Add option for separate distortion metric for datasets.
Report summary of unaligned cells in quantile_align_SNF.

Also added option to calculate agreement on aligned factors.

Use irlba_prcomp to speed up distortion metric calculation.
Add option for separate distortion metric for datasets.
Report summary of unaligned cells in quantile_align_SNF.
@vkozareva vkozareva requested a review from jw156605 June 8, 2018 18:41
@MacoskoLab MacoskoLab merged commit 146b8bf into master Jun 8, 2018
@MacoskoLab MacoskoLab deleted the improve-alignment-distortion branch June 8, 2018 19:55
mvfki added a commit that referenced this pull request Feb 29, 2024
link to leidenalg instead of building it and static linking
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