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Releases: weng-lab/cabbagelooper

Figure source data

01 Sep 18:28
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v1-source-data

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Cabbage looper genome assembly v1.0

07 Jul 17:27
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  • Cabbage looper genome assembly tn1.
  • Scaffolds: tn1.scaffolds.fasta.gz
  • Contigs: tn1.contigs.fasta.gz
  • RepeatMasker output: tn1.rmsk_out.gz
  • Repeat consensus sequence: tn1.repeatmodeler.fasta.gz

Cabbage looper genome annotation v1.0

07 Jul 17:35
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  • Official gene set v1: tn1.genes.gff.gz
  • Gene annotation v1: tn1.annotation.txt.gz
  • Transcripts: tn1.transcripts.fasta.gz
  • Peptides tn1.pep.fasta.gz
  • piRNA cluster annotation in cabbage looper ovaries, testes, thoraces, and Hi5 cells: tn1.piRNAclusters.tar.gz
  • Genomic variants called in the genome using sequencing data from Hi5 cells:
    tn1.Hi5.tetraploid.vcf.gz