This repository has been archived by the owner on May 22, 2022. It is now read-only.
The MSA Viewer has been steadily developed and tested over the last two years.
Now we are proud to release our first stable version 1.0
Features
- super-fast canvas to render the MSA Viewer
- custom label,id,name
- conservation scores and gap scores
- multiple views to the same sequence object
- high-level overview box for larger alignments
- sequence logo
- support for very large files
- pluggable visualization elements
- out-of-the-box coloring and easy customization
- user selection (press CTRL to select multiple)
- hide sequence
- regex pattern search
- custom feature annotations
- zooming
- file import
- export to png or JalView
- hide by columns by gaps percentage, identity score
- custom sorting
- integration with the tnt tree viewer
- Git tags are now synchronized with npm versions and the CDN builds (cdn.bio.sh/msa//msa.min.gz.js)
- All future releases will use semantic versioning.
The MSA Viewer codebase has evolved over time too. While the project was initially written in CoffeeScript, it has been recently migrated to ECMAScript6 and our efforts will continue to ship a modern & slim MSA Viewer.