fixed bug for hapmap data conversion

xiaolei-lab · Jan 13, 2025 · afa8cfe · afa8cfe
1 parent 22b8ee2
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -2,8 +2,8 @@ Package: rMVP
 Type: Package
 Title: Memory-Efficient, Visualize-Enhanced, Parallel-Accelerated GWAS
         Tool
-Version: 1.3.5
-Date: 2024-12-30
+Version: 1.3.6
+Date: 2025-01-14
 Authors@R: c( person("Lilin", "Yin", role = "aut"), 
               person("Haohao", "Zhang", role = "aut"),
               person("Zhenshuang", "Tang", role = "aut"),

diff --git a/README.md b/README.md
@@ -1,4 +1,4 @@
-# rMVP [![](https://img.shields.io/badge/Issues-%2B-brightgreen.svg)](https://github.com/XiaoleiLiuBio/rMVP/issues/new) [![](http://www.r-pkg.org/badges/version/rMVP?color=red)](https://cran.r-project.org/package=rMVP) [![CRAN Version](https://www.r-pkg.org/badges/version/rMVP?color=yellow)](https://CRAN.R-project.org/package=rMVP) [![](https://img.shields.io/badge/GitHub-1.3.5-blueviolet.svg)]() ![](http://cranlogs.r-pkg.org/badges/grand-total/rMVP?color=green) [![](https://cranlogs.r-pkg.org/badges/rMVP)](https://cran.r-project.org/package=rMVP) <a href="https://hits.seeyoufarm.com"/><img src="https://hits.seeyoufarm.com/api/count/incr/badge.svg?url=https%3A%2F%2Fgithub.com%2Fxiaolei-lab%2FrMVP"/></a>
+# rMVP [![](https://img.shields.io/badge/Issues-%2B-brightgreen.svg)](https://github.com/XiaoleiLiuBio/rMVP/issues/new) [![](http://www.r-pkg.org/badges/version/rMVP?color=red)](https://cran.r-project.org/package=rMVP) [![CRAN Version](https://www.r-pkg.org/badges/version/rMVP?color=yellow)](https://CRAN.R-project.org/package=rMVP) [![](https://img.shields.io/badge/GitHub-1.3.6-blueviolet.svg)]() ![](http://cranlogs.r-pkg.org/badges/grand-total/rMVP?color=green) [![](https://cranlogs.r-pkg.org/badges/rMVP)](https://cran.r-project.org/package=rMVP) <a href="https://hits.seeyoufarm.com"/><img src="https://hits.seeyoufarm.com/api/count/incr/badge.svg?url=https%3A%2F%2Fgithub.com%2Fxiaolei-lab%2FrMVP"/></a>
 
 ## An [r](https://) package for [M](https://)emory-efficient, [V](https://)isualization-enhanced, and [P](https://)arallel-accelerated Genome-Wide Association Study
 
@@ -9,7 +9,7 @@
 </a>
 </p>
 
-### #-----------------***rMVP [v1.3.5]() is coming, and stronger and faster again!***------------------#
+### #-----------------***rMVP [v1.3.6]() is coming, and stronger and faster again!***------------------#
 
 ### Repos:
 **Github:** https://github.com/xiaolei-lab/rMVP  

diff --git a/src/data_converter.cpp b/src/data_converter.cpp
@@ -320,7 +320,7 @@ double hapmap_marker_parser(string m, char major, double NA_C) {
             (m[1] != 'A' && m[1] != 'T' && m[1] != 'G' && m[1] != 'C')) {
             return NA_C;
         } else {
-            return ((m[0] == major) ? '0' : '1') + ((m[1] == major) ? '0' : '1');
+            return ((m[0] == major) ? 0 : 1) + ((m[1] == major) ? 0 : 1);
         }
     }
     return NA_C;