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transitioned csodiaq to use pyproject.toml for installation
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[build-system] | ||
requires = ["setuptools", "setuptools-scm"] | ||
build-backend = "setuptools.build_meta" | ||
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[project] | ||
name = "CsoDIAq" | ||
version = "2.0.0" | ||
authors = [ | ||
{ name="Caleb Cranney", email="caleb.cranney.github@proton.me" }, | ||
] | ||
description = "Bioinformatics software package for identifying peptides and proteins in DIA and DISPA mass spectrometry data files." | ||
readme = "README.md" | ||
requires-python = ">=3.8" | ||
classifiers = [ | ||
"Programming Language :: Python :: 3", | ||
"License :: OSI Approved :: MIT License", | ||
"Intended Audience :: Science/Research", | ||
"Topic :: Scientific/Engineering :: Bio-Informatics", | ||
] | ||
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dependencies = [ | ||
'pyteomics>=4.4.1', | ||
'matplotlib>=3.3.4', | ||
'numba>=0.53.1', | ||
'numpy>=1.20.1', | ||
'pandas>=1.2.2', | ||
'Bio>=0.4.1', | ||
'PyQt5>=5.15.4', | ||
'lxml>=4.6.2', | ||
'scikit-learn>=1.1.2', | ||
] | ||
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[project.urls] | ||
"Homepage" = "https://github.com/xomicsdatascience/CsoDIAq" | ||
"Bug Tracker" = "https://github.com/xomicsdatascience/CsoDIAq/issues" | ||
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[project.scripts] | ||
csodiaq = "csodiaq.csodiaq:main" |
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QApplication, | ||
) | ||
import sys | ||
import os | ||
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from csodiaq.gui.windows import MainWindow | ||
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csodiaq/gui/windows/MainWindow.py → src/csodiaq/gui/windows/MainWindow.py
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...entification/outputFormattingFunctions.py → ...entification/outputFormattingFunctions.py
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csodiaq/identification/poolingFunctions.py → ...sodiaq/identification/poolingFunctions.py
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from csodiaq.loaders.query import QueryLoaderContext | ||
from csodiaq.loaders.library import LibraryLoaderContext | ||
from csodiaq.loaders.query import QueryLoaderContext |
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