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1. TIdeS TIdeS Public

   ML approach to discerning "best" Open Reading Frames (ORFs) from "noisy" transcriptomic data. Intended for identification of lineage-specific genes and decontamination from scRNA-seq assemblies.

   Python 7 1

2. Ciliate_LSGF Ciliate_LSGF Public

3. SRMP SRMP Public

   Part of the Science Research Mentorship Program (2021-2022) at the American Museum of Natural History.

   Python

4. DSaGA DSaGA Public

   Pipeline to aid in "Delineating Somatic and Genome Architecture", predominantly from partial genomes and transcriptomes of ciliate species.

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5. GenArch GenArch Public

   Approaches to assess general genome architecture in sequenced and annotated genomes

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6. BioToolBox BioToolBox Public

   Collection of useful scripts for personal research.

   Python