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[FIX] Fix GPU Tractography #1069

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wants to merge 36 commits into from
Closed

[FIX] Fix GPU Tractography #1069

wants to merge 36 commits into from

Commits on Jan 22, 2024

  1. [WIP, FIX] fix bug in gpu tractography

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    36000 committed Jan 22, 2024
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  2. force gpu image creation

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    36000 committed Jan 22, 2024
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  3. try this

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  4. everything in pyAFQ in RAS

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    36000 committed Jan 22, 2024
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  5. tidy this up

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    36000 committed Jan 22, 2024
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  6. revert gputractography file; add warning when reorienting

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    36000 committed Jan 22, 2024
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  7. change defaults again

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    36000 committed Jan 22, 2024
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  8. try this

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    36000 committed Jan 22, 2024
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  9. bg

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    36000 committed Jan 22, 2024
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  10. more BFs

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    36000 committed Jan 22, 2024
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  11. update this print statement

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    36000 committed Jan 22, 2024
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  12. update default to 12

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    36000 committed Jan 22, 2024
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  13. turn this back off

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    36000 committed Jan 22, 2024
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  14. add Singularity image

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    36000 committed Jan 22, 2024
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  15. sing fixes

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    36000 committed Jan 22, 2024
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  16. add branch option to singularity

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    36000 committed Jan 22, 2024
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  17. evolving singularity

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  18. finally get singularity working

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  19. update image file to new dwi_affine location

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    36000 committed Jan 22, 2024
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  20. put this back

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    36000 committed Jan 22, 2024
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  21. rework it so everything uses reoriented dwi

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    36000 committed Jan 22, 2024
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  22. update segmentation code to get rid of prepare image nonsense

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    36000 committed Jan 22, 2024
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  23. update as_img

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  24. make sure data is in right order

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    36000 committed Jan 22, 2024
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  25. BFs, remove orientation

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    36000 committed Jan 22, 2024
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  26. BF

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  27. i was wrong about this

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  28. Try CSA

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    36000 committed Jan 22, 2024
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  29. csa fixes

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    36000 committed Jan 22, 2024
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  30. try this

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  31. bf

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  32. clean up and clarify

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  33. BFs

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  34. BF

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    36000 committed Jan 22, 2024
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Commits on Jan 23, 2024

  1. set a seed here

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    36000 committed Jan 23, 2024
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  2. download templates into image

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    36000 committed Jan 23, 2024
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