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Enable redirection of all loggers by configuring a FileHandler within… #143

Enable redirection of all loggers by configuring a FileHandler within…

Enable redirection of all loggers by configuring a FileHandler within… #143

Workflow file for this run

# Jenkinsfile.monai-premerge
name: premerge-min
on:
# quick tests for pull requests and the releasing branches
push:
branches:
- dev
- main
- releasing/*
pull_request:
head_ref-ignore:
- dev
concurrency:
# automatically cancel the previously triggered workflows when there's a newer version
group: build-min-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: true
jobs:
# caching of these jobs:
# - docker-py3-pip- (shared)
# - ubuntu py37 pip-
# - os-latest-pip- (shared)
min-dep-os: # min dependencies installed tests for different OS
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [windows-latest, macOS-latest, ubuntu-latest]
timeout-minutes: 40
steps:
- uses: actions/checkout@v4
- name: Set up Python 3.9
uses: actions/setup-python@v5
with:
python-version: '3.9'
- name: Prepare pip wheel
run: |
which python
python -m pip install --upgrade pip wheel
- name: cache weekly timestamp
id: pip-cache
run: |
echo "datew=$(date '+%Y-%V')" >> $GITHUB_OUTPUT
echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT
shell: bash
- name: cache for pip
uses: actions/cache@v4
id: cache
with:
path: ${{ steps.pip-cache.outputs.dir }}
key: ${{ matrix.os }}-latest-pip-${{ steps.pip-cache.outputs.datew }}
- name: Install the dependencies
run: |
# min. requirements
python -m pip install torch --index-url https://download.pytorch.org/whl/cpu
python -m pip install -r requirements-min.txt
python -m pip list
BUILD_MONAI=0 python setup.py develop # no compile of extensions
shell: bash
- name: Run quick tests (CPU ${{ runner.os }})
run: |
python -c 'import torch; print(torch.__version__); print(torch.rand(5,3))'
python -c "import monai; monai.config.print_config()"
./runtests.sh --min
shell: bash
env:
QUICKTEST: True
NGC_API_KEY: ${{ secrets.NGC_API_KEY }}
NGC_ORG: ${{ secrets.NGC_ORG }}
NGC_TEAM: ${{ secrets.NGC_TEAM }}
min-dep-py3: # min dependencies installed tests for different python
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: ['3.9', '3.10', '3.11', '3.12']
timeout-minutes: 40
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Prepare pip wheel
run: |
which python
python -m pip install --user --upgrade pip setuptools wheel
- name: cache weekly timestamp
id: pip-cache
run: |
echo "datew=$(date '+%Y-%V')" >> $GITHUB_OUTPUT
echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT
shell: bash
- name: cache for pip
uses: actions/cache@v4
id: cache
with:
path: ${{ steps.pip-cache.outputs.dir }}
key: ubuntu-latest-latest-pip-${{ steps.pip-cache.outputs.datew }}
- name: Install the dependencies
run: |
# min. requirements
python -m pip install torch --extra-index-url https://download.pytorch.org/whl/cpu
python -m pip install -r requirements-min.txt
python -m pip list
BUILD_MONAI=0 python setup.py develop # no compile of extensions
shell: bash
- name: Run quick tests (CPU ${{ runner.os }})
run: |
python -c 'import torch; print(torch.__version__); print(torch.rand(5,3))'
python -c "import monai; monai.config.print_config()"
./runtests.sh --min
env:
QUICKTEST: True
NGC_API_KEY: ${{ secrets.NGC_API_KEY }}
NGC_ORG: ${{ secrets.NGC_ORG }}
NGC_TEAM: ${{ secrets.NGC_TEAM }}
min-dep-pytorch: # min dependencies installed tests for different pytorch
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
pytorch-version: ['1.10.2', '1.11.0', '1.12.1', '1.13', '2.0.1', 'latest']
timeout-minutes: 40
steps:
- uses: actions/checkout@v4
- name: Set up Python 3.9
uses: actions/setup-python@v5
with:
python-version: '3.9'
- name: Prepare pip wheel
run: |
which python
python -m pip install --user --upgrade pip setuptools wheel
- name: cache weekly timestamp
id: pip-cache
run: |
echo "datew=$(date '+%Y-%V')" >> $GITHUB_OUTPUT
echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT
shell: bash
- name: cache for pip
uses: actions/cache@v4
id: cache
with:
path: ${{ steps.pip-cache.outputs.dir }}
key: ubuntu-latest-latest-pip-${{ steps.pip-cache.outputs.datew }}
- name: Install the dependencies
run: |
# min. requirements
if [ ${{ matrix.pytorch-version }} == "latest" ]; then
python -m pip install torch
else
python -m pip install torch==${{ matrix.pytorch-version }}
fi
python -m pip install -r requirements-min.txt
python -m pip list
BUILD_MONAI=0 python setup.py develop # no compile of extensions
shell: bash
- name: Run quick tests (pytorch ${{ matrix.pytorch-version }})
run: |
python -c 'import torch; print(torch.__version__); print(torch.rand(5,3))'
python -c "import monai; monai.config.print_config()"
./runtests.sh --min
env:
QUICKTEST: True
NGC_API_KEY: ${{ secrets.NGC_API_KEY }}
NGC_ORG: ${{ secrets.NGC_ORG }}
NGC_TEAM: ${{ secrets.NGC_TEAM }}