Peter W. Rose, Structural Bioinformatics Lab, San Diego Supercomputer Center, UC San Diego, USA
Tim Head, Project member Jupyter Hub & mybinder.org and Wild Tree Tech, Brugg, Switzerland
Fergus Boyles, Oxford Protein Informatics Group, Department of Statistics, University of Oxford, United Kingdom
Fergus Imrie, Oxford Protein Informatics Group, Department of Statistics, University of Oxford, United Kingdom
This repository contains all the materials for the above ISMB/ECCB workshop.
Before the conference starts, please follow the instructions here to set everything up.
| Time | Topic | Key Materials |
|---|---|---|
| 9:00 - 9:30 | Introduction | Slides |
| 9:30 - 9:45 | Conda | Instructions |
| 9:45 - 10:15 | Jupyter | Instructions Intro Notebook 3D Visualization Notebook |
| 10:15 - 11:00 | Git and GitHub | Slides Instructions |
| 11:00 - 11:15 | Break | Coffee! |
| 11:15 - 11:45 | Binder | Slides Instructions |
| 11:45 - 12:45 | Projects | Instructions SCOP Class Prediction: Slides, Notebook 3D Visualization: Notebook |
| 12:45 - 13:00 | Wrap Up | Slides Survey/Feedback |
Jupyter Notebook
Jupyter Lab
If you encounter any problems with this repository, please report them here.