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Update Readme #21

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20 changes: 20 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -4,3 +4,23 @@
[![Dev](https://img.shields.io/badge/docs-dev-blue.svg)](https://yuehhua.github.io/CDGRNs.jl/dev/)
[![Build Status](https://github.com/yuehhua/CDGRNs.jl/actions/workflows/test.yml/badge.svg?branch=main)](https://github.com/yuehhua/CDGRNs.jl/actions/workflows/test.yml?query=branch%3Amain)
[![Coverage](https://codecov.io/gh/yuehhua/CDGRNs.jl/branch/main/graph/badge.svg)](https://codecov.io/gh/yuehhua/CDGRNs.jl)

CDGRNs.jl provides implementation of Context-Dependent Gene Regulatory Networks (CDGRN) model in Julia. This package provides basic functionalities and examples are work in progress.


## Citation

```
@article{10.1093/bib/bbac633,
author = {Tu, Yueh-Hua and Juan, Hsueh-Fen and Huang, Hsuan-Cheng},
title = "{Context-dependent gene regulatory network reveals regulation dynamics and cell trajectories using unspliced transcripts}",
journal = {Briefings in Bioinformatics},
year = {2023},
month = {01},
issn = {1477-4054},
doi = {10.1093/bib/bbac633},
url = {https://doi.org/10.1093/bib/bbac633},
note = {bbac633},
eprint = {https://academic.oup.com/bib/advance-article-pdf/doi/10.1093/bib/bbac633/48757164/bbac633.pdf},
}
```