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Update README.md
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zakandrewking authored Oct 17, 2016
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Expand Up @@ -2,4 +2,8 @@ This repository contains all the code and data for the results in this manuscrip

Zachary A. King, Edward J. O'Brien, Adam M. Feist, Bernhard O. Palsson. Literature mining supports a next-generation modeling approach to predict cellular byproduct secretion. bioRxiv 066944; doi: https://dx.doi.org/10.1101/066944

Currently, two dependencies for the code are not public. These are the Python packages `minime` and `ecolime`. When these are release, I will update `hindsight` with details on running them.
Currently, two dependencies for the code are not public. These are the Python packages `minime` and `ecolime`. When these are released, I will update `hindsight` with details on running them.

The `theseus` package is required. You can find it here:

https://github.com/zakandrewking/theseus

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