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Merge pull request NOAA-EMC#21 from jkhender/feature/chem
additional changes for generating initial conditions, running regrid, and running calc increment
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,110 @@ | ||
| #!/bin/bash | ||
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| ## this script checks to see if GDAS atmanal file exists on $GDASDIR | ||
| ## [/scratch2/BMC/public/data/grids/gdas/bufr] | ||
| ## and creates gdas_available file under $ICSDIR/${CDATE}/${CDUMP}/$CDUMP.$yyyymmdd/$hh | ||
| ## | ||
| ## if file is missing from $GDASDIR, pulls file from mass store | ||
| ## | ||
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| ############################################################### | ||
| ## Abstract: | ||
| ## Get GFS intitial conditions | ||
| ## RUN_ENVIR : runtime environment (emc | nco) | ||
| ## HOMEgfs : /full/path/to/workflow | ||
| ## EXPDIR : /full/path/to/config/files | ||
| ## CDATE : current date (YYYYMMDDHH) | ||
| ## CDUMP : cycle name (gdas / gfs) | ||
| ## PDY : current date (YYYYMMDD) | ||
| ## cyc : current cycle (HH) | ||
| ############################################################### | ||
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| ############################################################### | ||
| # Source FV3GFS workflow modules | ||
| . $HOMEgfs/ush/load_fv3gfs_modules.sh | ||
| status=$? | ||
| [[ $status -ne 0 ]] && exit $status | ||
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| ############################################################### | ||
| # Source relevant configs | ||
| configs="base" | ||
| for config in $configs; do | ||
| . $EXPDIR/config.${config} | ||
| status=$? | ||
| [[ $status -ne 0 ]] && exit $status | ||
| done | ||
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| ############################################################### | ||
| # Set script and dependency variablesyyyymmdd=`echo $CDATE | cut -c1-8` | ||
| yyyymmdd=$(echo $CDATE | cut -c1-8) | ||
| hh=$(echo $CDATE | cut -c9-10) | ||
| yyyy=$(echo $CDATE | cut -c1-4) | ||
| mm=$(echo $CDATE | cut -c5-6) | ||
| dd=$(echo $CDATE | cut -c7-8) | ||
| yyddd=$(date +%y%j -u -d $yyyymmdd) | ||
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| echo | ||
| echo "CDATE = $CDATE" | ||
| echo "CDUMP = $CDUMP" | ||
| echo "ICSDIR = $ICSDIR" | ||
| echo "PUBDIR = $PUBDIR" | ||
| echo "RETROGDAS = $RETROGDAS" | ||
| echo "GDASDIR = $GDASDIR" | ||
| echo "ROTDIR = $ROTDIR" | ||
| echo "PSLOT = $PSLOT" | ||
| echo | ||
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| ## initialize | ||
| fv3ic_dir=$ICSDIR/${CDATE}/${CDUMP}/$CDUMP.$yyyymmdd/$hh | ||
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| mkdir -p $fv3ic_dir | ||
| cd $fv3ic_dir | ||
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| echo "YYYYMMDDHH: ${yyyymmdd}${hh}" | ||
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| gdasfile=$GDASDIR/${yyddd}${hh}00.gdas.t${hh}z.atmanl.nemsio | ||
| ls $gdasfile #ESRL | ||
| status=$? | ||
| if [[ $status -ne 0 ]]; then | ||
| echo "missing $gdasfile on /public; check in $RETROGDAS..." | ||
| ls $gdasfile #ESRL | ||
| status=$? | ||
| elif [[ $status -ne 0 ]]; then | ||
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| echo "missing $gdasfile in $RETROGDAS; check on mass store..." | ||
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| # Operational archive | ||
| # /NCEPPROD/hpssprod/runhistory/rh${yyyy}/${yyyy}${mm}/${yyyy}${mm}${dd}/ | ||
| # {$nameprefix}_gfs_prod_gdas.${yyyy}${mm}${dd}_${hh}.gdas_nemsio.tar | ||
| # | ||
| # where nameprefix=com 00Z 02/26/2020 | ||
| # gpfs_dell1_nco_ios_com 12Z 06/12/2019 | ||
| # | ||
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| HPSSDIR="/NCEPPROD/hpssprod/runhistory/rh${yyyy}/${yyyy}${mm}/${yyyy}${mm}${dd}" | ||
| gdasfile="${HPSSDIR}/com_gfs_prod_gdas.${yyyy}${mm}${dd}_${hh}.gdas_nemsio.tar" | ||
| hsi -q list $gdasfile | ||
| status=$? | ||
| if [[ $status -ne 0 ]]; then | ||
| ### 12Z 12Jun2019 -- FV3GFS operational | ||
| echo "missing $gdasfile on mass store...; try gpfs_dell1 filename!" | ||
| gdasfile=${HPSSDIR}/gpfs_dell1_nco_ops_com_gfs_prod_gdas.${yyyy}${mm}${dd}_${hh}.gdas_nemsio.tar | ||
| hsi -q list $gdasfile | ||
| status=$? | ||
| if [[ $status -ne 0 ]]; then | ||
| echo "missing $gfsfile on mass store..." | ||
| exit 1 | ||
| fi | ||
| else | ||
| cd $fv3ic_dir | ||
| htar xvf ${gdasfile} ./gdas.${yyyymmdd}/${hh}/gdas.t${hh}z.atmanl.nemsio | ||
| mv gdas.${yyyymmdd}/${hh}/gdas.t${hh}z.atmanl.nemsio ./ | ||
| echo removing gdas.${yyyymmdd}/${hh}.... | ||
| rmdir gdas.${yyyymmdd}/${hh} gdas.${yyyymmdd} | ||
| touch gdas_available | ||
| fi | ||
| else | ||
| touch gdas_available | ||
| fi |
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