ssGSEA ignores parameters in 1.0.4

[verheytb]

Python 3.10.9
Linux-5.15.90.1-microsoft-standard-WSL2-x86_64-with-glibc2.35
gseapy 1.0.4

Calling gseapy.ssgsea should have working parameters. While the gene_sets and data parameters are passed, others (including min_size, max_size, verbose, etc) are not. I think I have located the offending code to line 259 in __init__.py

[chuiqin]

I also encountered the same problem. How did you solve it?

[joshscurll]

FYI, I have also just encountered this issue after updating to GSEApy v1.0.4 (installed with pip in a Conda environment running Python 3.9). This issue does not exist in GSEApy v1.0.3. When stepping through the GSEApy v1.0.4 ssgsea code in debug mode in a jupyter lab notebook, kwargs appears to be an empty dictionary when we reach line 259 in __init__.py, though I couldn't figure out from the preceding code why this happens.

[zqfang]

Fixed in v1.0.5