BiSB Bootcamp 2019

Welcome to BiSB! Here you will find resources for Bootcamp (and beyond)!

• ./computing_environments_setup.md contains instructions on setting up your computing environment - e.g. Anaconda, Jupyter notebooks, notebook kernels
• ./unix_tutorial/ contains a Jupyter Bash notebook with some intro to Bash
• ./MLE_tutorial.ipynb is a Python Jupyter notebook with an intro to Maximum Likelihood Estimation
• ./GLM_tutorial.ipynb is a Python Jupyter notebook with a tutorial on setting up your own simple GLM with a Binomial link function
• ./OLS_tutorial.ipynb is a Python Jupyter notebook with a simple tutorial on implementing OLS
• ./resampling_methods_tutorial.ipynb is a tutorial on permutation tests on bootstrapping. Uses the following files:
  • ./treated_survival_times.txt
  • ./untreated_survival_times.txt
• ./p-values.ipynb is a Python Jupyter notebook with some demonstrations of the p-value distribution, hypothesis testing, and multiple testing correction