grab-fasta and grab-seq

• grab-fasta is use to extract a subset of the sequences of a FASTA file into another file.
• grab-seq scans one or many FASTA target files, and extract all regions that matches exactly a query sequence, with optionally flanking regions too.

This package is based on activities of the OGMP (i.e, prior to 2002), and becomes open source as part of MFannot.

Install

• To install grab-fasta you just need to copy the grab-fasta file in one of your executable directories (e.g: a directory list in $PATH).
• To install grab-seq you just need to copy the grab-seq file in one of your executable directories (e.g: a directory list in $PATH).

Note: At this point the installation of grab-fasta was only tested on Unix system (Ubuntu and CentOS).

Usage

• In order to get the help page of grab-fasta you need to type grab-fasta -h in your terminal.
• In order to get the help page of grab-fasta you need to type grab-seq -h in your terminal.

Contributing

Please see CONTRIBUTING and CONDUCT for details.

Credits

• All Contributors

License

GNU General Public License v3.0. Please see License File for more information.