GitHub - BIDS-Xu-Lab/Clinical_Entity_Recognition_Using_GPT

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 4 Commits
data		data
output		output
ChatGPT_MTSamples.ipynb		ChatGPT_MTSamples.ipynb
ChatGPT_VAERS.ipynb		ChatGPT_VAERS.ipynb
README.txt		README.txt
evaluate.py		evaluate.py
merged_gold_pred.eval_score.txt		merged_gold_pred.eval_score.txt
requirements.txt		requirements.txt

Repository files navigation

For each GPT model and each dataset, there are 5 output folders including:

1. baseline: This folder contains outputs using only component (1) Baseline prompts

2. baseline_definition_guideline： This folder contains outputs using components (1) Baseline prompts + (2) Annotation guideline-based prompts

3. baseline_definition_guideline_erroranalysis： This folder contains outputs using components (1) Baseline prompts + (2) Annotation guideline-based prompts + (3) Error analysis-based instructions

4. baseline_definition_guideline_erroranalysis_1shot： This folder contains outputs using components (1) Baseline prompts + (2) Annotation guideline-based prompts + (3) Error analysis-based instructions + (4) 1 annotated samples

5. baseline_definition_guideline_erroranalysis_5shot： This folder contains outputs using components (1) Baseline prompts + (2) Annotation guideline-based prompts + (3) Error analysis-based instructions + (4) 5 annotated samples