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| name: Test suite | |
| on: | |
| workflow_dispatch: | |
| pull_request: | |
| branches: | |
| - develop | |
| - master | |
| paths: | |
| - .github/workflows/testsuite.yml | |
| - segmetrics/*.py | |
| - setup.py | |
| - tests/*.py | |
| - tests/*.csv | |
| - requirements.txt | |
| push: | |
| branches: | |
| - master | |
| permissions: | |
| contents: read | |
| issues: write | |
| pull-requests: write | |
| jobs: | |
| python_lint: | |
| name: Linting | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install flake8 isort | |
| - name: Run flake8 | |
| shell: bash | |
| run: | | |
| flake8 segmetrics | |
| flake8 tests | |
| - name: Run isort | |
| shell: bash | |
| run: | | |
| isort segmetrics --check-only | |
| isort tests --check-only | |
| type_checking: | |
| name: Type checking | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install mypy | |
| - name: Run mypy | |
| shell: bash | |
| run: | | |
| mypy --config-file .mypy.ini --ignore-missing-imports segmetrics | |
| run_testsuite: | |
| name: Tests | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: | |
| - "3.8" | |
| - "3.9" | |
| - "3.10" | |
| - "3.11" | |
| - "3.12" | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Install system dependencies | |
| shell: bash | |
| run: | | |
| sudo apt install -y libopenblas-dev | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -r requirements.txt | |
| pip install -r tests/requirements.txt | |
| - name: Run tests | |
| uses: kostrykin/report-test-coverage-action@v1.0.0 | |
| with: | |
| report: ${{ strategy.job-index == 0 }} | |
| gist-id: f46ddefff0798639bc320b13331dc7ca | |
| github-auth: ${{ secrets.GITHUB_TOKEN }} | |
| gist-auth: ${{ secrets.GIST_SECRET }} | |
| gist-filename: segmetrics.json | |
| run: | | |
| coverage run -m unittest discover | |
| python -m coverage json --omit "tests/*,segmetrics/deprecated.py" |