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chore: reorder for readability
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kelly-sovacool committed Oct 4, 2023
1 parent 4718afb commit fd9cae2
Showing 1 changed file with 4 additions and 4 deletions.
8 changes: 4 additions & 4 deletions conf/genomes.config
Original file line number Diff line number Diff line change
Expand Up @@ -3,18 +3,18 @@ params {
'hg38' {
blacklist_index = "${params.index_dir}/hg38_basic/indexes/blacklist/*"
reference_index = "${params.index_dir}/hg38_basic/indexes/hg38*"
effective_genome_size = 2700000000
chromosomes_dir = "${params.index_dir}/hg38_basic/Chromsomes/"
chrom_sizes = "${params.index_dir}/hg38_basic/indexes/hg38.fa.sizes"
gene_info = "${params.index_dir}/hg38_basic/geneinfo.bed"
chromosomes_dir = "${params.index_dir}/hg38_basic/Chromsomes/"
effective_genome_size = 2700000000
}
'mm10' {
blacklist_index = "${params.index_dir}/mm10_basic/indexes/mm10.blacklist.chrM.chr_rDNA.*"
reference_index = "${params.index_dir}/mm10_basic/indexes/mm10*"
effective_genome_size = 2400000000
chromosomes_dir = "${params.index_dir}/mm10_basic/Chromsomes/"
chrom_sizes = "${params.index_dir}/mm10_basic/indexes/mm10.fa.sizes"
gene_info = "${params.index_dir}/mm10_basic/geneinfo.bed"
chromosomes_dir = "${params.index_dir}/mm10_basic/Chromsomes/"
effective_genome_size = 2400000000
}
}
}

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