Merge pull request #452 from yech1990/master

fix read1 error in writing filtered result
CGATOxford · Feb 1, 2021 · a14dea7 · a14dea7
2 parents 124f1dc + 580c21f
commit a14dea7
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/umi_tools/extract.py b/umi_tools/extract.py
@@ -443,7 +443,7 @@ def main(argv=None):
 
             if not new_read:
                 if options.filtered_out:
-                    filtered_out.write(str(read1) + "\n")
+                    filtered_out.write(str(read) + "\n")
                 continue
 
             options.stdout.write(str(new_read) + "\n")