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fix read1 error in writing filtered result #452

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merged 2 commits into from
Feb 1, 2021
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y9c
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@y9c y9c commented Jan 22, 2021

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@IanSudbery
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Is it possible to link this to an issue describing the problem you are trying to fix?

As far as I can tell, your change at line 446 looks reasonable, but the change at 427 looks like it means that no read1 will ever be output unless output of filtered reads is set to true. I assume this is why the PR test is failing.

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y9c commented Jan 25, 2021

clsoe #453

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Thanks for contributing, we appreciate it.

@IanSudbery IanSudbery merged commit a14dea7 into CGATOxford:master Feb 1, 2021
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2 participants