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CanDIG / clinical_ETL_code Public

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DIG-1247: Check that submitter_specimen_id refers to a valid specimen#26

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daisieh merged 7 commits intomainCanDIG/clinical_ETL_code:mainfrom daisieh/mapping-fixesCanDIG/clinical_ETL_code:daisieh/mapping-fixesCopy head branch name to clipboard

Aug 17, 2023

+105-58

Conversation Commits7 (7)Checks Files changed

Commits

Commits on Aug 16, 2023

update a few mappings in the templates
daisieh
committed
Missed a () in boolean()
daisieh
committed
treatment_type is an array
daisieh
committed
compare surgery.submitter_specimen_id to valid specimen IDs
daisieh
committed
fix incorrect mappings
daisieh
committed

Commits on Aug 17, 2023

add test for submitter_specimen_id check
daisieh
committed
don't raise an exception
daisieh
committed

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