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80 Open 1,134 Closed
80 Open 1,134 Closed
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Issues list

Orders containing only external data should have the status set to open
#4283 opened Mar 12, 2025 by karlnyr
1 task
Tag Orders containing samples with External data samples with "external-data"
#4282 opened Mar 12, 2025 by karlnyr
1 task
Decouple Compression/decompression completion from rest of the code
#4281 opened Mar 12, 2025 by islean
See Upload Error in TB Effort M Gain L Urgency M
#4276 opened Mar 11, 2025 by RasmusBurge-CG
1 task
(Re-)enable TIDDIT coverage and UPD tracks for Scout upload
#4275 opened Mar 11, 2025 by dnil
(Pipeline Implementation) Points to clarify with devbio
#4273 opened Mar 7, 2025 by islean
5
Provide customers with a valid JSON-file for FASTQ and RML orders
#4272 opened Mar 7, 2025 by Vince-janv
@islean
2
Technical debt: Reference path not used in Crunchy technical-debt Complicating development in the repo
#4263 opened Mar 4, 2025 by islean
Add assemble file to the files to delivery for microSALT sample tags Effort S Gain S Urgency M
#4256 opened Feb 28, 2025 by karlnyr
1 task
[Pipeline integration] Create correct nextflow sample sheet for Raredisease
#4254 opened Feb 28, 2025 by diitaz93
Add validation that samples within a case have the same analysis type technical-debt Complicating development in the repo
#4253 opened Feb 28, 2025 by diitaz93
2 tasks
1
Allow the user to specify the amount of cases to start with "start-available" for balsamic and MIP-DNA Effort S Gain L Urgency L
#4251 opened Feb 27, 2025 by karlnyr
2 tasks
PacBio post-processing runs and fails on running sequencing runs
#4249 opened Feb 26, 2025 by Vince-janv
Assign the correct priority to a raredisease CaseConfig
#4240 opened Feb 21, 2025 by diitaz93
[Pipeline integration] Create correctly the params file for raredisease
#4239 opened Feb 21, 2025 by diitaz93
ordering - unclear error message when mandatory columns are empty customer-experience
#4223 opened Feb 18, 2025 by diitaz93
Change delivery message for taxprofiler Effort S Gain M Urgency L
#4222 opened Feb 18, 2025 by beatrizsavinhas
1 task
Standardized Organism Selection for Reliable Microbial Typing Effort M Gain M Urgency M
#4217 opened Feb 18, 2025 by karlnyr
7 tasks
Create a TowerSubmitter
#4216 opened Feb 17, 2025 by Vince-janv
Create the SubProcessSubmitter
#4215 opened Feb 17, 2025 by Vince-janv Standardised pipeline integration
Create MicrosaltConfigurator
#4213 opened Feb 17, 2025 by Vince-janv Standardised pipeline integration
Create RarediseaseConfigurator
#4212 opened Feb 17, 2025 by Vince-janv Standardised pipeline integration
@diitaz93
Create a TowerClient
#4210 opened Feb 17, 2025 by Vince-janv Standardised pipeline integration
1
Post Delivery Messages to Freshdesk
#4199 opened Feb 12, 2025 by RasmusBurge-CG
4 tasks
3
Align cancel samples methods
#4179 opened Feb 5, 2025 by islean
3 tasks
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