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Pull requests: Clinical-Genomics/cg

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Pull requests list

WIP
#4547 opened Aug 14, 2025 by RasmusBurge-CG Loading…
15 tasks
1
Add MIP-DNA case config and configurator (#4538)
#4544 opened Aug 11, 2025 by mogmi Loading…
15 tasks
1
Integration test for mip-dna start-available
#4543 opened Aug 7, 2025 by mogmi • Draft
15 tasks
1
Show Pacbio run name and plate in sample sequencing metrics
#4542 opened Aug 7, 2025 by islean • Draft
15 tasks
1
1
Make RNAFUSION samples be always tumour
#4537 opened Aug 1, 2025 by diitaz93 • Draft
2 of 12 tasks
2
23
dev(Balsamic) Address bugs in CLI
#4535 opened Jul 30, 2025 by Vince-janv Loading…
1
dev(Balsamic Start) Support starting Balsamic using AnalysisStarter
#4524 opened Jul 24, 2025 by Vince-janv Loading…
2
add d4 file to scout case config load
#4522 opened Jul 24, 2025 by mathiasbio • Draft
15 tasks
1
Remove APIRequest outside of TB
#4502 opened Jul 11, 2025 by islean Loading…
15 tasks
4
Filter cancelled Samples for Tomte dna upload
#4498 opened Jul 8, 2025 by ahdamin Loading…
15 tasks
1
chore: create LICENSE file
#4472 opened Jun 26, 2025 by pbiology Loading…
1 of 3 tasks
1
feat(Sequencing QC) Change logic for microSALT
#4467 opened Jun 25, 2025 by Vince-janv Loading…
1
2
Balsamic v18 changes
#4453 opened Jun 18, 2025 by mathiasbio • Draft
15 tasks
2
allow unknown balsamic gender
#4452 opened Jun 18, 2025 by mathiasbio • Draft
15 tasks
4
Add somatic normal sv artefacts
#4433 opened Jun 5, 2025 by mathiasbio • Draft
15 tasks
1
Feat(Vulture) Add Vulture pre-commit to cleanup dead code
#4430 opened Jun 5, 2025 by Vince-janv Loading…
6 tasks done
1
13
Nallo add QC checks for peddy kinship and somalier sex bioinfo-dev Issues related to the development and testing of bionfo pipelines
#4426 opened Jun 3, 2025 by peterpru • Draft
1 of 17 tasks
@peterpru
2
Rnafusion 4
#4385 opened May 7, 2025 by rannick • Draft
15 tasks
2
feat: changes for balsamic submit
#4317 opened Mar 28, 2025 by mathiasbio • Draft
4 of 19 tasks
3
work in progress: FreshDesk CLI
#4290 opened Mar 14, 2025 by RasmusBurge-CG • Draft
15 tasks
1
feat(keycloak authentication)
#4162 opened Jan 28, 2025 by ChrOertlin Loading…
15 tasks
1
22
Enable hidden analysis in TB to be uploaded
#4003 opened Dec 6, 2024 by eliottBo Loading…
1 of 15 tasks
1
@eliottBo
4
fetch tissue type from original sample
#3979 opened Nov 27, 2024 by rannick Loading…
15 tasks
6
feat(update): Pydantic model
#3828 opened Oct 10, 2024 by henrikstranneheim Loading…
1 of 15 tasks
@henrikstranneheim
8
reduce-log-level-compress
#3811 opened Oct 7, 2024 by Vince-janv Loading…
2
ProTip! Updated in the last three days: updated:>2025-08-11.