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@DeepGraphLearning

MilaGraph

Research group led by Prof. Jian Tang at Mila-Quebec AI Institute (https://mila.quebec/) focusing on graph representation learning and graph neural networks.

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  1. torchdrug torchdrug Public

    A powerful and flexible machine learning platform for drug discovery

    Python 1.4k 200

  2. ULTRA ULTRA Public

    A foundation model for knowledge graph reasoning

    Python 468 63

  3. GMNN GMNN Public

    Graph Markov Neural Networks

    Python 400 99

  4. GearNet GearNet Public

    GearNet and Geometric Pretraining Methods for Protein Structure Representation Learning, ICLR'2023 (https://arxiv.org/abs/2203.06125)

    Python 270 27

  5. NBFNet NBFNet Public

    Official implementation of Neural Bellman-Ford Networks (NeurIPS 2021)

    Python 196 29

  6. ConfGF ConfGF Public

    Implementation of Learning Gradient Fields for Molecular Conformation Generation (ICML 2021).

    Python 160 35

Repositories

Showing 10 of 47 repositories
  • scCello Public

    [NeurIPS 2024 Spotlight] A cell-ontology guided transcriptome foundation model

    DeepGraphLearning/scCello’s past year of commit activity
    1 0 0 0 Updated Oct 29, 2024
  • MATH60630A_2024A Public
    DeepGraphLearning/MATH60630A_2024A’s past year of commit activity
    SCSS 0 0 0 0 Updated Oct 28, 2024
  • ULTRA Public

    A foundation model for knowledge graph reasoning

    DeepGraphLearning/ULTRA’s past year of commit activity
    Python 468 MIT 63 3 0 Updated Oct 2, 2024
  • GearBind Public

    Pretrainable geometric graph neural network for antibody affinity maturation

    DeepGraphLearning/GearBind’s past year of commit activity
    Python 32 Apache-2.0 4 3 0 Updated Aug 21, 2024
  • torchdrug Public

    A powerful and flexible machine learning platform for drug discovery

    DeepGraphLearning/torchdrug’s past year of commit activity
    Python 1,436 Apache-2.0 200 109 (1 issue needs help) 12 Updated Aug 12, 2024
  • graphvite Public

    GraphVite: A General and High-performance Graph Embedding System

    DeepGraphLearning/graphvite’s past year of commit activity
    C++ 1,225 Apache-2.0 152 53 0 Updated Jun 14, 2024
  • GraphAny Public

    GraphAny: A foundation model for node classification on any graph.

    DeepGraphLearning/GraphAny’s past year of commit activity
    Python 110 MIT 8 0 0 Updated Jun 7, 2024
  • esm-s Public

    Structure-Informed Protein Language Model

    DeepGraphLearning/esm-s’s past year of commit activity
    Python 26 3 3 0 Updated Feb 15, 2024
  • KnowledgeGraphEmbedding Public
    DeepGraphLearning/KnowledgeGraphEmbedding’s past year of commit activity
    Python 1,266 MIT 267 6 2 Updated Dec 15, 2023
  • DiffPack Public

    Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing

    DeepGraphLearning/DiffPack’s past year of commit activity
    Python 73 MIT 6 8 0 Updated Dec 4, 2023
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