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Merge from liulab-dfci #4

Merged
merged 17 commits into from
Aug 11, 2020
Merged

Merge from liulab-dfci #4

merged 17 commits into from
Aug 11, 2020

Commits on Jul 26, 2020

  1. Support 10X output .h5 as input of MAESTRO scatac-genescore

    @DongqingSun
    DongqingSun committed Jul 26, 2020
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  2. Update Adjusted model to Enhanced model in gene score calculation

    @DongqingSun
    DongqingSun committed Jul 26, 2020
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  3. Delete unnecessary log printing

    @DongqingSun
    DongqingSun committed Jul 26, 2020
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  4. Rename ATACViewTrack and update rp model in scatac pipeline

    @DongqingSun
    DongqingSun committed Jul 26, 2020
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  5. Update documentation in MAESTRO/scATAC_Genescore.py

    @DongqingSun
    DongqingSun committed Jul 26, 2020
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Commits on Aug 4, 2020

  1. Add change log for v1.2.1

    @DongqingSun
    DongqingSun committed Aug 4, 2020
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Commits on Aug 5, 2020

  1. Update tutorial for scATAC, and add tutorial for gene activity modelling

    @DongqingSun
    DongqingSun committed Aug 5, 2020
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  2. Add gene activity image

    @DongqingSun
    DongqingSun committed Aug 5, 2020
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  3. update image path in gene activity tutorial, and add documentation fo… 

    …r skipping annotation part
    @DongqingSun
    DongqingSun committed Aug 5, 2020
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  4. Update iamge size

    @DongqingSun
    DongqingSun committed Aug 5, 2020
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  5. Add newline at the end of the file, and point to liulab-dfci reposito… 

    …ry/conda channel
    @DongqingSun
    DongqingSun committed Aug 5, 2020
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Commits on Aug 7, 2020

  1. Merge pull request #48 from DongqingSun96/doc/tutorial-1.2.1 

    Update README and tutorial for v1.2.1
    @crazyhottommy
    crazyhottommy authored Aug 7, 2020
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  2. Merge pull request #49 from DongqingSun96/fix/cmd_MAESTRO_genescore 

    Fix the input bug in MAESTRO scatac-genescore
    @crazyhottommy
    crazyhottommy authored Aug 7, 2020
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Commits on Aug 10, 2020

  1. Merge pull request #1 from liulab-dfci/master 

    merge from upstream
    @crazyhottommy
    crazyhottommy authored Aug 10, 2020
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  2. add travis build badge

    @crazyhottommy
    crazyhottommy committed Aug 10, 2020
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  3. fix uploading conda package

    @crazyhottommy
    crazyhottommy committed Aug 10, 2020
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  4. Merge pull request #50 from crazyhottommy/fix/travis_conda 

    fix the travis uploading conda package
    @taoliu
    taoliu authored Aug 10, 2020
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