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Bulk Curation #416

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tholulomo opened this issue Jun 27, 2023 · 0 comments · Fixed by #420
Closed

Bulk Curation #416

tholulomo opened this issue Jun 27, 2023 · 0 comments · Fixed by #420

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@tholulomo
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Describe the task

Currently, users can upload single samples one after another. This task seeks to create a bulk curation upload for multiple samples.

Additional context

Add any other context about the problem here.
tholulomo added a commit that referenced this issue Jul 1, 2023
@tholulomo
feat(#416): Fix styling and page issues for admin portal
5ef3dc6
tholulomo added a commit that referenced this issue Jul 1, 2023
@tholulomo
feat(#416): Add a library to unzip files on the server
561ae1d
tholulomo added a commit that referenced this issue Jul 1, 2023
@tholulomo
feat(#416): adding a middleware to calculate latency and add it to ba…
8963a98 
…ckend server response
tholulomo added a commit that referenced this issue Jul 1, 2023
@tholulomo
feat(#416): Adding bulk curation feature and updated swagger doc with…
ece8363 
… its new endpoint
tholulomo added a commit that referenced this issue Jul 1, 2023
@tholulomo
feat(#416): Fix reusable search component import
6810da2
tholulomo added a commit that referenced this issue Jul 1, 2023
@tholulomo
feat(#416): Update deleteFile import at auth check
621a2ab
tholulomo added a commit that referenced this issue Jul 1, 2023
@tholulomo
feat(#416): Add unit testing for bulk curation
906ad11
@tholulomo tholulomo mentioned this issue Jul 1, 2023
Merged
@aswallace aswallace mentioned this issue Jul 3, 2023
Closed
tholulomo added a commit that referenced this issue Jul 5, 2023
@tholulomo
feat(#416): Refactor file directory name to be served from env config
6871c20
tholulomo added a commit that referenced this issue Jul 11, 2023
@tholulomo
feat(#416): Add new mongo collection for storing temporary files
901d94f
tholulomo added a commit that referenced this issue Jul 11, 2023
@tholulomo
feat(#416): Remove latency logic and merge into middleware
98a7fd3
tholulomo added a commit that referenced this issue Jul 11, 2023
@tholulomo
feat(#416): Creating a whitelist of acceptable files
9f95874
tholulomo added a commit that referenced this issue Jul 11, 2023
@tholulomo
feat(#416): Update file validation logic and add files route to swagger
246aab3
tholulomo added a commit that referenced this issue Jul 11, 2023
@tholulomo
feat(#416): Updating latency response middleware service
55f9a13
tholulomo added a commit that referenced this issue Jul 11, 2023
@tholulomo
feat(#416): Updating bulk curation logic
6e63043
tholulomo added a commit that referenced this issue Jul 13, 2023
@tholulomo
feat(#416): Properly define and set file response headers
855bfd6
tholulomo added a commit that referenced this issue Jul 18, 2023
@tholulomo
feat(#416): Add coverage threshold to frontend app test
8bcfaab
tholulomo added a commit that referenced this issue Jul 18, 2023
@tholulomo
feat(#416): Fix UI styling bugs, fix image loader gallery bug, fix im…
6c7f9a7 
…age total response bug on search and updated unit test
tholulomo added a commit that referenced this issue Jul 18, 2023
@tholulomo
feat(#416): Updating minio image and added required environment varia…
4aa4124 
…bles required by the restful service
tholulomo added a commit that referenced this issue Jul 18, 2023
@tholulomo
feat(#416): Exposing minio on proxy
dcc9da0
tholulomo added a commit that referenced this issue Jul 18, 2023
@tholulomo
feat(#416): Adding default minio bucket name
352a4dd
tholulomo added a commit that referenced this issue Jul 18, 2023
@tholulomo
feat(#416): Installing minio package for restful service
a7b663e
tholulomo added a commit that referenced this issue Jul 18, 2023
@tholulomo
feat(#416): Adding minio connection utils
7a3a512
tholulomo added a commit that referenced this issue Jul 18, 2023
@tholulomo
feat(#416): Adding logic to parse nested files to filemanager utils l…
01fdb26 
…ogic
tholulomo added a commit that referenced this issue Jul 18, 2023
@tholulomo
feat(#416): Enabling minio s3 bucket storage
c851901
tholulomo added a commit that referenced this issue Jul 18, 2023
@tholulomo
feat(#416): Update unit test for file and bulk curation changes
0e48dcc
tholulomo added a commit that referenced this issue Jul 18, 2023
@tholulomo
feat(#416): Removing unused collection
fdd9d3f
tholulomo added a commit that referenced this issue Jul 18, 2023
@tholulomo
feat(#416): Update bulk curation to curate nested folders in root and…
8486725 
… ignore _MACOSX folders
tholulomo added a commit that referenced this issue Jul 18, 2023
@tholulomo
feat(#416): Update failing test and linter fixes
311d4cf
tholulomo added a commit that referenced this issue Jul 24, 2023
@tholulomo
feat(#416): Reusing imageTotal on search page to render total number …
4181343 
…of images
tholulomo added a commit that referenced this issue Jul 24, 2023
@tholulomo
feat(#416): Linting and text fixes
10a8ec1
tholulomo added a commit that referenced this issue Jul 26, 2023
@tholulomo
feat(#416): Merge upstream changes
fd0b70a
tholulomo added a commit that referenced this issue Jul 26, 2023
@tholulomo
feat(#416): Add bucket store link for admin user
a21f999
tholulomo added a commit that referenced this issue Jul 26, 2023
@tholulomo
feat(#416): Configure bucket storage proxy
d8fae4f
tholulomo added a commit that referenced this issue Jul 26, 2023
@tholulomo
feat(#416): Bucket store code fixes
57b5765
tholulomo added a commit that referenced this issue Jul 26, 2023
@tholulomo
feat(#416): Unit test fix
aaa0df3
tholulomo added a commit that referenced this issue Jul 26, 2023
@tholulomo
feat(#416): Unit test fix
50074c3
tholulomo added a commit that referenced this issue Aug 6, 2023
@tholulomo
Merge pull request #420 from Duke-MatSci/#416_Bulk_Curation
dcbaefb 
#416 bulk curation
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#416 bulk curation Duke-MatSci/materialsmine
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@tholulomo