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@FredHutch

Fred Hutch Cancer Center

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  1. Oncoscape Oncoscape Public

    a web application to apply/develop analysis tools for Molecular and Clinical data

    JavaScript 179 45

  2. motuz motuz Public

    Motuz - A web based infrastructure for large scale data movements between on-premise and cloud

    JavaScript 104 12

  3. SEACR SEACR Public

    SEACR: Sparse Enrichment Analysis for CUT&RUN

    Shell 102 45

  4. slurm-examples slurm-examples Public

    examples of using slurm in life sciences workflows using posix file systems and object storage

    Shell 39 14

  5. proxmox-tools proxmox-tools Public

    prox command line interface for proxmox and other tools and customizations

    Python 38 5

  6. wiki wiki Public

    SciWiki: Collective KnowledgeBase for Scientific Data and Use

    HTML 36 46

Repositories

Showing 10 of 583 repositories
  • wiki Public

    SciWiki: Collective KnowledgeBase for Scientific Data and Use

    FredHutch/wiki’s past year of commit activity
    HTML 36 46 64 5 Updated Nov 9, 2024
  • gig-map Public

    Build a map of genes present across a set of microbial genomes

    FredHutch/gig-map’s past year of commit activity
    Python 12 4 0 0 Updated Nov 9, 2024
  • nf-virscan-qc Public

    Nextflow workflow for performing quality control analysis of VirScan datasets

    FredHutch/nf-virscan-qc’s past year of commit activity
    Nextflow 1 0 0 0 Updated Nov 8, 2024
  • seatrac-hackday-2024 Public

    Materials for TRAC-sponsored TB Hackday 2024

    FredHutch/seatrac-hackday-2024’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Nov 8, 2024
  • tfcb_2024 Public

    Course website for MCB 536 Tools for Computational Biology Fall 2024

    FredHutch/tfcb_2024’s past year of commit activity
    Jupyter Notebook 3 18 0 2 Updated Nov 8, 2024
  • shiny-cromwell Public

    Shiny app for interacting with the Fred Hutch instances of Cromwell. Contact Taylor Firman.

    FredHutch/shiny-cromwell’s past year of commit activity
    R 3 MIT 3 66 2 Updated Nov 7, 2024
  • docker-proSCessoR Public

    Docker image with libraries needed to run proSCessoR

    FredHutch/docker-proSCessoR’s past year of commit activity
    Dockerfile 0 0 0 0 Updated Nov 7, 2024
  • easybuild-life-sciences Public

    Howto and implementation documentation

    FredHutch/easybuild-life-sciences’s past year of commit activity
    C++ 21 6 6 0 Updated Nov 7, 2024
  • ww-vc-trio_sanaz Public Forked from getwilds/ww-vc-trio

    Variant calling WDL workflow using a trio of variant callers and analyzing consensus among them

    FredHutch/ww-vc-trio_sanaz’s past year of commit activity
    Jupyter Notebook 1 MIT 2 0 0 Updated Nov 7, 2024
  • aws-batch-wrapper Public

    Simplify interaction with AWS Batch at Fred Hutch

    FredHutch/aws-batch-wrapper’s past year of commit activity
    Python 1 0 1 6 Updated Nov 7, 2024
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