Fix read vs ref not finding primary alignment on certain CRAM files

[cmdcolin]

Currently, there is a routine to get the primary read if you start with a supplementary read for linear ReadVsRef visualization. It requests reads overlapping a single base pair where the start of the primary read is. One issue though is there is likely an off-by-one error in specifically CRAM feature fetching where if I request reads overlapping ctgA:0-1, it does not return anything. Making it request ctgA:0-2 is a workaround, but fixing the off by one would be worthwhile

Also, fixes error handling on the read vs ref dialog (previously, the error wasn't displayed)

[cmdcolin]

Found doing read vs ref on volvox examples here http://localhost:3000/?config=test_data%2Fvolvox%2Fconfig.json&session=share-0nezxdT0cn&password=TJePa

[codecov]

Codecov Report

Merging #2952 (e566b2f) into main (58a7a4d) will increase coverage by 0.03%.
The diff coverage is 50.00%.

❗ Current head e566b2f differs from pull request most recent head 1f83c59. Consider uploading reports for the commit 1f83c59 to get more accurate results

@@            Coverage Diff             @@
##             main    #2952      +/-   ##
==========================================
+ Coverage   60.67%   60.71%   +0.03%     
==========================================
  Files         601      601              
  Lines       27341    27341              
  Branches     6654     6655       +1     
==========================================
+ Hits        16590    16599       +9     
+ Misses      10441    10431      -10     
- Partials      310      311       +1     

Impacted Files	Coverage Δ
plugins/linear-comparative-view/src/ReadVsRef.tsx	63.90% <33.33%> (-0.60%)	⬇️
...ments/src/SNPCoverageAdapter/SNPCoverageAdapter.ts	56.37% <100.00%> (ø)
...ckages/core/pluggableElementTypes/RpcMethodType.ts	83.33% <0.00%> (-2.09%)	⬇️
packages/core/util/layouts/GranularRectLayout.ts	87.28% <0.00%> (+0.42%)	⬆️
...FeatureRenderer/components/ProcessedTranscript.tsx	88.73% <0.00%> (+1.40%)	⬆️
packages/core/TextSearch/TextSearchManager.ts	91.89% <0.00%> (+2.70%)	⬆️
...inearGenomeView/components/RefNameAutocomplete.tsx	84.84% <0.00%> (+3.03%)	⬆️
...gins/svg/src/SvgFeatureRenderer/components/util.ts	95.91% <0.00%> (+4.08%)	⬆️
...src/SvgFeatureRenderer/components/FeatureLabel.tsx	86.20% <0.00%> (+6.89%)	⬆️
...svg/src/SvgFeatureRenderer/components/Segments.tsx	92.85% <0.00%> (+7.14%)	⬆️

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