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28 Open 90 Closed
28 Open 90 Closed
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Issues list

retrain an Arabidopsis model based on vir1 mutants and VIRc
#184 opened Dec 30, 2024 by hanyishui0612
How to trace back methylated read IDs
#183 opened Dec 20, 2024 by gsukrit
Using xpore vs m6Anet
#182 opened Dec 5, 2024 by baibhav-bioinfo
2
Batch effect RNA002 vs RNA004
#181 opened Dec 4, 2024 by NStrowbridge
3
how to get the site-level labels of the arabidopsis
#180 opened Dec 2, 2024 by hanyishui0612
3
low number of predicted m6A sites
#179 opened Nov 25, 2024 by baibhav-bioinfo
1
finding Genomic location of predicted m6A sites
#178 opened Nov 18, 2024 by baibhav-bioinfo
2
Question about --read_proba_threshold in m6anet inference
#177 opened Oct 30, 2024 by cxy-26
5
partition in nanopolish eventalign output
#176 opened Oct 20, 2024 by baibhav-bioinfo
24
m6Anet giving output with NaNs in the table
#175 opened Oct 11, 2024 by baibhav-bioinfo
1
data.indiv_proba.csv and probability threshold
#174 opened Oct 11, 2024 by sashajenner
1
differential m6A methylation between sample groups
#173 opened Sep 24, 2024 by eltonjrv
3
Output does not include 3' ends of reads
#171 opened Aug 13, 2024 by esh97
3
Arabidopsis VIRC instead of col0 (wild type)
#166 opened Jun 2, 2024 by haotianteng
4
Issues with Read Selection
#163 opened Apr 12, 2024 by AKjhu
2
m6anet, eventalign, galaxy
#155 opened Mar 6, 2024 by mocherry
8
Genome vs transcriptome alignment
#154 opened Mar 1, 2024 by rugilemat
4
Empty Eventalign.txt for Negative Sense Viral RNA
#151 opened Feb 17, 2024 by AlexFitzgeraldBryan
1
Question about the PCA in the paper
#149 opened Jan 27, 2024 by huawen-poppy
Inference JSONDecoderError
#146 opened Jan 5, 2024 by sangyu
2
Arabidopsis m6anet model for RNA004
#145 opened Dec 12, 2023 by Papareddy
2
Error: Single positional indexer is out of bounds error
#138 opened Oct 28, 2023 by gsukrit
1
Questions about the m6anet inference results
#133 opened Sep 16, 2023 by mumdark
3
Reproducing Fig 2d,e; request for transcriptome2genome.py for dummies
#125 opened Jul 19, 2023 by hengjwj
2
m6anet-inference error
#121 opened Jul 15, 2023 by XichenZhao0223
7
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