updated tests and examples

JaneliaSciComp · Apr 11, 2022 · b2fe545 · b2fe545
1 parent 0d49f93
commit b2fe545
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diff --git a/notebooks/python_api_examples.ipynb b/notebooks/python_api_examples.ipynb
diff --git a/tests/test_model.py b/tests/test_model.py
@@ -19,9 +19,6 @@
 }
 """)
 
-
-
-
 def test_EMImageLookup():
     lookup = EMImageLookup(**by_body)
     assert len(lookup.results) == 1
@@ -35,3 +32,48 @@ def test_EMImageLookup():
     assert img.neuronInstance == "KCa'b'-ap1_R"
     assert img.gender == Gender.female
 
+ppp_results = json.loads(
+"""
+{
+  "maskId": "2941779053884998178",
+  "maskPublishedName": "636798093",
+  "maskLibraryName": "FlyEM_Hemibrain_v1.2.1",
+  "neuronType": "LHPV5c1_a",
+  "neuronInstance": "LHPV5c1_a_R",
+  "results": [
+    {
+      "id": "2422546586627211362",
+      "publishedName": "VT043138",
+      "libraryName": "FlyLight_Gen1_MCFO",
+      "pppRank": 0.0,
+      "pppScore": 118,
+      "slideCode": "20170616_61_E3",
+      "objective": "40x",
+      "gender": "m",
+      "alignmentSpace": "JRC2018_Unisex_20x_HR",
+      "mountingProtocol": "DPX PBS Mounting",
+      "coverageScore": -118.74299431298442,
+      "aggregateCoverage": 96.55475533690863,
+      "mirrored": true,
+      "files": {
+        "ColorDepthMip": "63/636798093/636798093-VT043138-20170616_61_E3-40x-JRC2018_Unisex_20x_HR-ch.png",
+        "SignalMipMaskedSkel": "63/636798093/636798093-VT043138-20170616_61_E3-40x-JRC2018_Unisex_20x_HR-skel.png",
+        "ColorDepthMipSkel": "63/636798093/636798093-VT043138-20170616_61_E3-40x-JRC2018_Unisex_20x_HR-ch_skel.png",
+        "SignalMip": "63/636798093/636798093-VT043138-20170616_61_E3-40x-JRC2018_Unisex_20x_HR-raw.png",
+        "SignalMipMasked": "63/636798093/636798093-VT043138-20170616_61_E3-40x-JRC2018_Unisex_20x_HR-masked_raw.png"
+      },
+      "imageStack": "https://s3.amazonaws.com/janelia-flylight-imagery/Gen1+MCFO/VT043138/VT043138-20170616_61_E3-m-40x-central-GAL4-JRC2018_Unisex_20x_HR-aligned_stack.h5j"
+    }
+]}
+"""
+)
+
+def test_PPPMatches():
+    ppp = PPPMatches(**ppp_results)
+    assert ppp.maskId == "2941779053884998178"
+    assert len(ppp.results) == 1
+    img = ppp.results[0]
+    assert img.id == "2422546586627211362"
+    assert img.mirrored == True
+    assert img.gender == Gender.male
+    assert img.files.ColorDepthMip == "63/636798093/636798093-VT043138-20170616_61_E3-40x-JRC2018_Unisex_20x_HR-ch.png"