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@Ken-Lau-Lab

Ken Lau Lab

Software developed by members of the Lau Lab at Vanderbilt University

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  1. STAR_Protocol STAR_Protocol Public

    Forked from bobchen1701/STAR_Protocol

    Python 4 5

  2. STAR_Methods STAR_Methods Public

    This repository contains examples of code used to generate the figures in the manuscript: Human colorectal pre-cancer atlas identifies distinct molecular programs underlying two major subclasses of…

    Jupyter Notebook 2 3

  3. NSC-seq NSC-seq Public

    Jupyter Notebook 2 1

  4. AmbiQuant AmbiQuant Public

    Quantification of scRNA-seq raw data quality

    Jupyter Notebook 2

  5. dropkick dropkick Public

    Forked from KenLauLab/dropkick

    Automated cell filtering for single-cell RNA sequencing data

    Python 1

  6. Ken-Lau-Lab.github.io Ken-Lau-Lab.github.io Public

    JavaScript 1

Repositories

Showing 10 of 17 repositories
  • dropkick Public Forked from KenLauLab/dropkick

    Automated cell filtering for single-cell RNA sequencing data

    Ken-Lau-Lab/dropkick’s past year of commit activity
    Python 1 MIT 8 0 0 Updated Oct 11, 2024
  • MTGR1_SI_stem_cell_analysis Public

    Code used to generate scRNA-seq analysis figures in Short et al. (2024) 'MTGR1 is required to maintain small intestinal stem cell populations'

    Ken-Lau-Lab/MTGR1_SI_stem_cell_analysis’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jul 19, 2024
  • NSC-seq Public
    Ken-Lau-Lab/NSC-seq’s past year of commit activity
    Jupyter Notebook 2 MIT 1 0 0 Updated May 29, 2024
  • spatial_CRC_atlas Public

    Code to reproduce results from Heiser, et al. (2023)

    Ken-Lau-Lab/spatial_CRC_atlas’s past year of commit activity
    Jupyter Notebook 1 MIT 1 2 0 Updated Apr 3, 2024
  • single-cell-lectures Public

    Lecture contents for single-cell analysis in Python

    Ken-Lau-Lab/single-cell-lectures’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Feb 13, 2024
  • MILWRM Public Forked from codyheiser/MILWRM

    Consensus tissue region identification from multiplex molecular image data for digital pathology

    Ken-Lau-Lab/MILWRM’s past year of commit activity
    Python 1 MIT 2 0 0 Updated Feb 9, 2024
  • spatial_CRC_atlas_imaging Public
    Ken-Lau-Lab/spatial_CRC_atlas_imaging’s past year of commit activity
    MATLAB 1 0 0 0 Updated Jan 5, 2024
  • AmbiQuant Public

    Quantification of scRNA-seq raw data quality

    Ken-Lau-Lab/AmbiQuant’s past year of commit activity
    Jupyter Notebook 2 0 1 0 Updated Sep 18, 2023
  • pCreode Public Forked from KenLauLab/pCreode

    An algorithm for mapping cell state transitions.

    Ken-Lau-Lab/pCreode’s past year of commit activity
    Jupyter Notebook 0 GPL-2.0 13 0 0 Updated Feb 21, 2023
  • STAR_Protocol Public Forked from bobchen1701/STAR_Protocol
    Ken-Lau-Lab/STAR_Protocol’s past year of commit activity
    Python 4 MIT 8 0 0 Updated Jan 9, 2023
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