Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Proposed structure for user roles. #832

Merged
merged 3 commits into from
Feb 15, 2024
Merged

Proposed structure for user roles. #832

merged 3 commits into from
Feb 15, 2024

Conversation

CBroz1
Copy link
Member

@CBroz1 CBroz1 commented Feb 14, 2024

Description

This PR makes edits to database_settings.py to allow for easier management of user permissions via roles. This would allow new modules to be added to the dj_user role, rather than require retroactive granting of access to the new module to all existing users by hand.

This PR also makes an edit to the PK of a params table in decoding that caused excessive key length errors.

Checklist:

  • This PR should be accompanied by a release: no
  • (If release) I have updated the CITATION.cff
  • I have updated the CHANGELOG.md
  • I have added/edited docs/notebooks to reflect the changes

@CBroz1 CBroz1 marked this pull request as ready for review February 14, 2024 22:43
@CBroz1 CBroz1 requested a review from edeno February 14, 2024 22:43
@edeno edeno merged commit afc150c into LorenFrankLab:master Feb 15, 2024
7 checks passed
- dj_admin: all for all prefix

Note: To add dj_user role to all those with common access, run:
query = "SELECT user, host FROM mysql.db WHERE Db LIKE 'common%';"
Copy link
Member Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Oops - this requires escaped wildcard; LIKE 'common%%'

@@ -25,27 +19,42 @@
"waveform",
Copy link
Member Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Perhaps this should include linearization

edeno added a commit that referenced this pull request Feb 20, 2024
* Fault-permit insert and remove mutual exclusivity protections on Merge (#824)

* #719, #804, #212

* #768

* Add merge delete and populate

* Changes following PR review @edeno

* Replace delayed import of ImportedSpikeSorting

* Update CITATION.cff (#826)

* Update CITATION.cff

* Update change log

* Update ref

* Add MUA notebook and fix numbering.

* Only apply include labels filter if include_labels not empty (#827)

* dont skip unit if include_labels list is empty

* update check for np array size

* gh-actions docs fixes (#828)

* Update 'latest' in docs deploy

* Docs bugfix. Rename Link action, incorporate cspell.

* MUA as own heading

* Update README.md

* Fix citation

* Fix citation

* include all relevant restrictions on video file

* Proposed structure for user roles. (#832)

* Add roles

* Remove use of unix user group. Add note for retroactive role assign

* Add docs on roles and external tables. Reduce key length

* Fix test for update of position tools (#835)

Related to single LED halving the data bug

* fix build error in mamba and restriction for dlc

* flush stdout before converting mp4

* Fix notebook name (#840)

* remove deprecated yaml.safe_load function

* Fix test

* replace deprecated yaml.safe_load function

* only call no_transaction_make if video key not present

---------

Co-authored-by: Chris Brozdowski <Chris.Broz@ucsf.edu>
Co-authored-by: Eric Denovellis <edeno@users.noreply.github.com>
Co-authored-by: Eric Denovellis <edeno@bu.edu>
edeno added a commit that referenced this pull request Feb 21, 2024
* allow for  multicamera epochs

* change VideoFile definition

* update video_file_num iteration

* add update methods

* change VideoFile restriction in get_video_path

* modify formatting in position_dlc_project

* allow selective video selection in pose estimation

* add NotImplementedError to DLCProject insert

* allow for video file addition after proj creation

* fix add_video_files

* fix video_file_num determination in VideoFile

* modify add_video_files method

* change call to add_video_files

* modify interval_list_name call

* Fix linting errors

* Tested DLC multicam pipeline  (#841)

* Fault-permit insert and remove mutual exclusivity protections on Merge (#824)

* #719, #804, #212

* #768

* Add merge delete and populate

* Changes following PR review @edeno

* Replace delayed import of ImportedSpikeSorting

* Update CITATION.cff (#826)

* Update CITATION.cff

* Update change log

* Update ref

* Add MUA notebook and fix numbering.

* Only apply include labels filter if include_labels not empty (#827)

* dont skip unit if include_labels list is empty

* update check for np array size

* gh-actions docs fixes (#828)

* Update 'latest' in docs deploy

* Docs bugfix. Rename Link action, incorporate cspell.

* MUA as own heading

* Update README.md

* Fix citation

* Fix citation

* include all relevant restrictions on video file

* Proposed structure for user roles. (#832)

* Add roles

* Remove use of unix user group. Add note for retroactive role assign

* Add docs on roles and external tables. Reduce key length

* Fix test for update of position tools (#835)

Related to single LED halving the data bug

* fix build error in mamba and restriction for dlc

* flush stdout before converting mp4

* Fix notebook name (#840)

* remove deprecated yaml.safe_load function

* Fix test

* replace deprecated yaml.safe_load function

* only call no_transaction_make if video key not present
---------

Co-authored-by: dpeg22 <dpeg22@gmail.com>
Co-authored-by: CBroz1 <CBrozdowski@yahoo.com>
Co-authored-by: Samuel Bray <sam.bray@ucsf.edu>
Co-authored-by: Chris Brozdowski <Chris.Broz@ucsf.edu>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants