machine instructions: edison

Purge environment:

module rm craype
module load craype/2.5.0

module rm PrgEnv-intel
module rm PrgEnv-cray
module rm PrgEnv-gnu
module rm intel
module rm cce
module rm gcc
module rm pmi
module rm cray-mpich2
module rm cray-mpich
module rm cray-hdf5
module rm cray-hdf5-parallel
module rm cray-netcdf
module rm cray-netcdf-hdf5parallel
module rm cray-parallel-netcdf
module rm craype-sandybridge
module rm craype-ivybridge
module rm cray-libsci
module rm papi
module rm cmake
module rm cray-petsc
module rm esmf

Load cray modules

module load craype-ivybridge
module load cray-libsci/13.0.3
module load pmi/5.0.10-1.0000.11050.0.0.ari

Load intel modules

module load PrgEnv-intel/5.2.56
module load intel/15.0.1.133

Load MPI and PAPI modules

module load cray-mpich/7.3.0
module load papi/5.4.1.3

Load netcdf and pnetcdf modules

module load cray-hdf5-parallel/1.8.14
module load cray-netcdf-hdf5parallel/4.3.3.1
module load cray-parallel-netcdf/1.6.1

Export NETCDF / PNetCDF variables

export NETCDF=${NETCDF_DIR}
export PNETCDF=${PARALLEL_NETCDF_DIR}

Build PIO (v1.7.2):

./configure CC=ftn CC=cc MPIF90=ftn MPIF77=ftn FC=ftn F77=ftn F90=ftn MPIFC=ftn MPICC=cc MPICXX=cc CXX=cc NETCDF_PATH=${NETCDF} PNETCDF_PATH=${PNETCDF}

Export PIO variables:

export PIO=/global/homes/a/asarje/edison/pio1_6_3/pio

Load TAU moduels / variables

export TAU=/global/project/projectdirs/acts/TAU/tau-2.25.1
export PATH=${TAU}/craycnl/bin:$PATH
export TAU_MAKEFILE=${TAU}/craycnl/lib/Makefile.tau-intel-papi-mpi-pdt
export TAU_OPTIONS='-optRevert -optNoCompInst'

Alternate TAU instructions:

#export TAU_MAKEFILE=/usr/common/usg/TAU/2.24/INTEL/craycnl/lib/Makefile.tau-intel-papi-mpi-pdt #export TAU_OPTIONS='-optRevert -optNoCompInst'

Build MPAS

make intel-nersc CORE=ocean TOOL_TARGET_ARCH="-target-cpu=sandybridge" TAU=true TIMER_LIB=tau