Skip to content

add submodule linking to scPortrait-notebooks #435

add submodule linking to scPortrait-notebooks

add submodule linking to scPortrait-notebooks #435

# This is a basic workflow to help you get started with Actions
name: Build Documentation
on: [push]
jobs:
build-linux:
runs-on: ubuntu-latest
strategy:
max-parallel: 5
steps:
- uses: actions/checkout@v4
- name: Set up Python 3.10
uses: actions/setup-python@v2
with:
python-version: "3.10"
- name: set up Pandoc
uses: r-lib/actions/setup-pandoc@v2
with:
pandoc-version: "3.1.11" # The pandoc version to download (if necessary) and use.
- name: Add conda to system path
run: |
# $CONDA is an environment variable pointing to the root of the miniconda directory
echo $CONDA/bin >> $GITHUB_PATH
- name: Install dependencies
run: |
conda install -y python=3.10
conda env update --file .github/additional_files/environment.yml --name base
- name: Install package
run: |
pip install ./
- name: Install Sphinx and additional dependences
run: |
sudo apt install pandoc
pip install sphinx sphinx-rtd-theme==2.0.0 sphinx-autodoc-typehints sphinx-argparse nbsphinx renku-sphinx-theme
- name: Generate Documentation
run: |
cd docs
make clean
make html