feature/coupled-crow updating to use latest ups-weather #210
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- changed a few names from fv3 to ufs
removing cice5 references
…updatesforconsistency
match ufs-weather-model tests/parm templates for easier updates and also added updates for frac grid/not frac grid option
…d iovrlw will be replaced by a single iovr option
…consistencyupdates
includes updates to make CICE input file ice_in match the latest in the rt test options, updates to include fractional grid options (set to false for now), update to have namelist options iovrsw and iovrlw will be replaced by a single iovr which was needed after NCAR/ccpp-physics#514
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Output from a test can be found on orion at: /work/noaa/marine/jmeixner/p6consitency/test01 and for hera at: /scratch2/NCEPDEV/climate/Jessica.Meixner/p6workflow/test_nonfrac/COMROOT/test02 |
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@JessicaMeixner-NOAA can you give me the code and script dir on HERA ? |
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@jiandewang the local copy of the workflow is here: /scratch2/NCEPDEV/climate/Jessica.Meixner/p6workflow/fracgrid but I have made local changes building on this to test the fractional grid (just in the workflow/cases directory) so FYI it's not a perfect match anymore. Sorry about that. It's not been changed on orion which is here: /work/noaa/marine/jmeixner/p6consitency/global-workflow |
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@JessicaMeixner-NOAA file changes look fine, let me check the results. Your run is frac_grid=F, right ? |
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@jiandewang correct, there are now flags for fractional grid now but they are all set to false for now |
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Is there a reason both nems.configure files are retained? nems.configure.med_atm_ocn_ice.IN should be identical to nems.configure.cpld.IN (same for nems.configure.cpld_wave.IN) |
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No. I'll delete the extra. Thanks for catching that!
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@JessicaMeixner-NOAA I checked your run results, they look good. Since you have run them already I am not going to repeat that, is this fine ? |
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It worked on multiple platforms for me so I think that sufficiently tested some sort of user environment issue hopefully. So it's okay with me. Thanks for checking everything @jiandewang |
jiandewang
approved these changes
Dec 10, 2020
JianKuang-Intelsat
approved these changes
Dec 11, 2020
WalterKolczynski-NOAA
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to WalterKolczynski-NOAA/global-workflow
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Jan 13, 2021
…kflow into feature/port_coupled_wcoss_dell * 'feature/coupled-crow' of github.com:NOAA-EMC/global-workflow: Feature/gfsv16intocoupled (NOAA-EMC#194) feature/coupled-crow fractional grid (NOAA-EMC#218) updating module file so that atm pos will work (NOAA-EMC#214) feature/coupled-crow updating to use latest ups-weather (NOAA-EMC#210) feature/coupled-crow: Updates for consistency (NOAA-EMC#199) modify modulefile.reg2grb2.orion, modulefile.reg2grb2.hera and build_reg2grb2.sh to use hpc-stack library update readme to current wave post status rest of post jobs that should have been committed at this point, the post jobs for the waves post run, but the gridded grib2 files are not correct modifications for wave jobs after updating to be closer to v16 wave scripts but work for feature/coupled-crow update ENV files for wave jobs update wave jobs updates from gfsv16b-waves add correct path to wave exe remove exit update ww3 build script add building of WW3 pre and prep jobs currently requires extra module files (can be removed when base uses hpc-stack) update for module files on orion and adding building of wave prep updating scrip files for waves to match gfsv16b updating ush files for waves to match gfsv16b (includes restructure) cleanup (1) set IC dir path as /work/noaa/marine/Partha.Bhattacharjee/IC_Dir in workflow/platforms/orion.yaml (2) add extra white space in ush/nems_configure.sh in line 56 to eliminate warning in run log (3) correction on restart_n template variable setting in ush/nems.configure.med_atm_ocn_ice.IN corrections on E-P calculation in regdiag.f final updates to make cmeps forecasts run add pointer to which mediator restart for cmeps updates for CMEPS mediator adding MED pets so that they only use the forecast not write grid pets updates for nems.configure for running with CMEPS updating ice_in see NOAA-EMC/CICE5#25 adding nems.configure to the log file add note to use rocoto/1.3.2 on orion as this version has fix for the UNAVAILABLE issue reg2grb2 now builds on orion updates of an lmod->lmod/lmod update to build of fv3_coupled updates for wave post jobs - changing exe dir location updating build to work with CMEPS cleanup from duplications adding cycle definition to wave post job fixing syntax error in JWAVE_PREP job for variables that are not actively being used change for lmod -> lmod/lmod on orion updated README updates - everything but wave post seems to run now, part of wave post does updating model to latest tag add waves to jglobal forecast config updated wave-realted scripts to match gfsv16 branch updated environment files env/ORION.env updated configuration system fix nems.configure for cold start at this point the ocean post is now running updates for forecast with waves updating forecast job for wave jobs updates to run wave prep for s2s case wave init now works on orion put ic type variable into config.fv3ic add ocean, ice and wave configurable variables add ocean, ice and wave configurable variables adding missing file from last commit wave init job now works on hera ocean post hours at boundary are processed twice, now fixed. point WW3-related executables through HOMEgfs/fv3_coupled.fd/exec updates for running wave jobs updates for wave defaults for s2s p4 fix bugs in config.wave and coupled_ic.sh first try for adding wave ICs move OCNPETS, ICEPETS and WAVEPETS into dedicated model-specific sessions instead of fv3_gfs_settings bug fix in layout file bugfix in layout file changes to wave case cleaning up double cplwav adding updates to wave scripts from gfsv16b branch by @ajhenrique add ocn-ice build to readme Merged and ready for test reg2grb2 Build on Hera and Orion orion hera build test reg2grb2 for test on feature coupled-crow wave post-process job update Revise CCPP_SUITE variable name, default option, to "IPD" Fix suite name of CCPP Move cplwav and cplwav2atm variable 1, Moved some of the variables into configuration system from JWAVE scripts 2, Wave configuration system built out 3, Modularized scripts updated to accomodate wave variables fix module-setup.sh.inc script, which causes module purge unsuccessful wave configuration update wave configuration files both forecast and atm post seem to be running okay on orion updating module_base.orion that allows cold start to run. Not sure if other jobs will now fail though or if what is in your .bashrc file will effect the success/failure of the run. fix typo updates for tar files and do not keep data adding ncks, updating ocean post, some fixes for tar files mediator cold start succeeds on hera and forecast job starts post jobs for atmosphere are no longer triggered on cold starts updates to readme for orion updating module files on hera we don't want to cycle/have 4 runs per day so setting the cases to be just 1 IC updating module files to match s2s model and ncep post modules last of archive updates for p4 updating for reorganized tar files, pulling in changes from wcoss-p2 workflow making a fix dir of all available ccpp suite files copying suite xml file to rundirectory updates for CCPP suite used in p4 updates for ice_in to match prototype 4 update diag_table for ocean renaming exe to reflect updated build updates for new fix (which includes prep for multiple resolutions) and some clean-up more updates for ICs updates for copying ICs replace MOM6IC with BASE_CPLIC for base directory location of IC for s2s model and made it platform dependent. (Orion location is temporary and needs to be replaced, can also be changed in cases/coupled_free_forecast.yaml to users prefered location) fixed error when linking on hera removing fix from .gitignore making Externals_coupled.cfg consistent with checkout.sh update UPP version to v1.0.8 updates to checkout, build and link to run prototype 4 automate fix file linking, to this location: /work/noaa/marine/jmeixner/tempFixICdir/fix/fix_prep_benchmark3 expand gitignore case file adjustment for Orion IC update checkout and External.cfg checkout and External.cfg update remove HERA-like paths in platform.yaml of Orion port to Orion reiflag default value changed to 1 generalize fix file directory for imp_physics 8 configuration update for CCPP scripts turn off stochastic features in case file update on sandbox platform, for FIX_SCRUB settings delete falseful copy after namelist and model_configure parsing add FNMSKH conditional clause, coupled vs non-coupled stochastic variables update OCNTIM and ICETIM are included in config.fv3 ice variable istep0 bug fix stochy variable namelist update, add hard-coded variables into config.fcst (fcst.yaml) capital case CDUMP values in config.fv3 add stoch variables to config.fcst scripts update: CCPP and IPD works merge in the latest revision from IPD work model_configure_DATM move all default values into /defaults from /schema clean up unused schema move default value into defaults/ Clean up exwave_post_sbs Moving standalone fv3 model_config exglobal_fcst block into if/else/fi cplwav model_config block. Reinstating config.wave block in JGLOBAL_FORECAST. Pointing EXECwave to HOMEgfs/exec directory for WW3 util executables (changed link_fv3gfs.sh accordingly). Removing debug options from compile.sh line in build_fv3.sh. Fix to JWAVE_PREP to look back a day for rtofs Squashing commits to wave2global bug fix, POSTGRB2TBL undefined Pointing to v3.1 tag for ufs-s2s-model making readme consistant with user.yaml.default
lgannoaa
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Feb 9, 2022
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This PR has updates to use ufs-weather-model from 12/7/2020 commit 0cf031e
This will close issue #172
Updates include: