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Changes for NeuroML v2.3.1 release #418

Merged
merged 673 commits into from
Aug 20, 2024
Merged

Changes for NeuroML v2.3.1 release #418

merged 673 commits into from
Aug 20, 2024

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pgleeson
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AdityaPandeyCN and others added 30 commits May 21, 2024 01:04
Better handling of nested if statements in xpp parser
It's being used in plotting and vispy and is a small enough package to
include as default.
Added translate_cell function
Annotations: completes exporting and extraction of annotations that we use in NeuroML
chore: improve contributing documentation
sanjayankur31 and others added 29 commits July 11, 2024 16:27
Feat/export swc-Adds function to export SWC graph to a new SWC file
Using the clear after calling `generate_plot` did work if the plot was
being shown, but when it was not, the file was already saved by
`generate_plot` with the ticks and clearing would not do anything.

Also sets the x axis for LEMS time series to "time (s)" because we know
this will be the case
This functionality is not specific to the vispy plotter.
fix(moose): correct math operator
Improve checks to ensure that the right input files are provided for each pynml command
Changes from master merged in
To v1.3.7 & use  jnml v0.13.3
To v1.3.8; allows xml or sbml files to be validated as SBML
@pgleeson pgleeson merged commit 20ee07e into master Aug 20, 2024
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5 participants